View source for Restraint.vmd.script

 #opens the file that has the atoms that are to be restrained
 # if amber inputs do this
 # mol load parm7 parm.file rst7 crd.file
 # if namd inputs do this
 mol load psf psf.file pdb pdb.file 
 
 set case [atomselect top "all and noh or protein"]
 # change atom selections to your protein
 $case set beta 5 # this is the restraint this is high.
 $all writepdb ./gdp.restraint01.pdb
 
 quit