File list
This special page shows all uploaded files.
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| Date | Name | Thumbnail | Size | User | Description | Versions |
|---|---|---|---|---|---|---|
| 15:40, 14 February 2009 | Trpcagesimhbond.bmp (file) |  |
692 KB | Pholden | Reverted to earlier revision | 3 |
| 15:42, 14 February 2009 | Trpcagesimhbondgraph.bmp (file) |  |
719 KB | Pholden | Graph of distance between Trp H and Arg O in simulation. Note it never achieves appropriate H-Bond distance. It is 1.87A in the native structure. | 1 |
| 10:28, 16 February 2009 | 350KHbond.bmp (file) |  |
719 KB | Pholden | The Trp H and Arg O interaction in TrpCage. Data from a simulation run at 350K. | 1 |
| 10:30, 16 February 2009 | 350KRMSD.bmp (file) |  |
719 KB | Pholden | RMSD plot of the backbone of a simulation of TrpCage at 350K vs. the native state. Native state taken from first model of 1L2Y.pdb. | 1 |
| 10:25, 18 February 2009 | AnnealingRMSD.bmp (file) |  |
1.1 MB | Pholden | Simulated Annealing of TrpCage vs. Native State (1L2Y) | 1 |
| 15:09, 18 February 2009 | Linux-101-Hacks.pdf (file) |  |
839 KB | Sudipto | 1 | |
| 16:57, 18 February 2009 | Nadocktest.jpg (file) |  |
102 KB | Jdseitz | 1 | |
| 17:10, 18 February 2009 | Rigid flexoverlaid.jpg (file) |  |
37 KB | Nray | 1 | |
| 17:20, 18 February 2009 | Nadocktestclose.jpg (file) |  |
104 KB | Jdseitz | 1 | |
| 17:22, 18 February 2009 | Mdx multiplot.png (file) |  |
5 KB | Lebarron | 1 | |
| 18:01, 18 February 2009 | 1F8B-ligand.jpg (file) |  |
28 KB | Jmaier | 2 | |
| 16:40, 19 February 2009 | Suface.png (file) |  |
405 KB | Xinyu | Surface of the protein | 1 |
| 16:16, 25 February 2009 | Ex xmgrace line histogram.png (file) |  |
17 KB | Tbalius | 2 | |
| 16:24, 25 February 2009 | Ex xmgrace standard histogram.png (file) |  |
17 KB | Tbalius | 1 | |
| 12:04, 12 May 2009 | Dell5110cn.XP.A05.Driver.zip (file) |  |
1.86 MB | Sudipto | Dell5110cn.XP.A05.Driver.zip | 1 |
| 14:37, 12 June 2009 | How to wire Ethernet Cables.png (file) |  |
252 KB | Sudipto | 1 | |
| 13:29, 31 August 2009 | Group 001.png (file) |  |
370 KB | Rizzo | 1 | |
| 17:51, 11 January 2010 | Thermodynamic Integration cycle.jpg (file) |  |
9 KB | Stonybrook | 1 | |
| 17:54, 11 January 2010 | Picture1.jpg (file) |  |
18 KB | Stonybrook | 1 | |
| 14:32, 9 February 2010 | Amber10i-1- - Manual.pdf (file) | |
1,016 KB | Kehauser | Amber 10 Manual | 1 |
| 14:43, 9 February 2010 | 1DF8.pdb.gz (file) | |
49 KB | Kehauser | Biotin Streptavidin pdb.gz | 1 |
| 01:45, 12 February 2010 | 图片.JPG (file) |  |
125 KB | Stonybrook | 1 | |
| 01:47, 12 February 2010 | T4 TIMD results.jpg (file) |  |
125 KB | Stonybrook | 1 | |
| 01:51, 12 February 2010 | T4 data result.jpg (file) |  |
17 KB | Stonybrook | 1 | |
| 10:40, 20 February 2010 | Surface.png (file) |  |
115 KB | Anchang | Streptavidin enzyme surface | 1 |
| 17:59, 22 February 2010 | Best rigiddock.png (file) |  |
104 KB | Anchang | 1 | |
| 17:59, 22 February 2010 | 2nd best rigiddock.png (file) |  |
106 KB | Anchang | 1 | |
| 16:12, 1 March 2010 | MMGBSA ΔΔG.txt (file) |  |
25 KB | Haoquan | 1 | |
| 19:37, 1 March 2010 | Wikilogo.png (file) |  |
24 KB | Tbalius | 1 | |
| 17:35, 5 March 2010 | 2008.ams535.class.picture.jpg (file) |  |
65 KB | Rizzo | 1 | |
| 17:42, 5 March 2010 | 2009.ams535.class.picture.jpg (file) |  |
185 KB | Rizzo | 3 | |
| 23:19, 8 March 2010 | Data.MMGBSA vs time (file) | |
26 KB | Haoquan | 1 | |
| 23:45, 8 March 2010 | Graph1.jpg (file) |  |
238 KB | Haoquan | 1 | |
| 15:40, 10 March 2010 | 111.png (file) |  |
22 KB | Eric | 1 | |
| 13:58, 10 April 2010 | E asis (file) | |
6 KB | Kehauser | Use Word Pad to view in windows. This is the Perl script from the Amber installation. It could also be found in the Amber Tutorials. "Process_mdout.pl" is the filename, I believe.. | 1 |
| 18:05, 29 June 2010 | Jibril.email.png (file) |  |
1 KB | Stonybrook | 3 | |
| 15:13, 19 August 2010 | Lingling.email.png (file) |  |
678 bytes | Lingling | 1 | |
| 18:16, 13 September 2010 | CARBONIC ANHYDRASExtalmin.1000iter-tether10ENERGYbw.png (file) | Error creating thumbnail: File with dimensions greater than 12.5 MP |
324 KB | Sudipto | 1 | |
| 14:22, 9 December 2010 | 2010.ams535.class.picture.jpg (file) |  |
186 KB | Rizzo | 2 | |
| 17:39, 2 March 2011 | RMSD plot (file) | |
121 KB | Stonybrook | 1 | |
| 17:42, 2 March 2011 | RMSD Plot (file) |  |
29 KB | Stonybrook | 2 | |
| 17:25, 9 March 2011 | All spheres.dock tutorial.2011.png (file) |  |
443 KB | Sudipto | 1 | |
| 17:47, 9 March 2011 | Selected spheres.dock tutorial.2011.png (file) |  |
364 KB | Sudipto | 1 | |
| 10:18, 19 May 2011 | Gleevec.correct.png (file) |  |
66 KB | Tbalius | 1 | |
| 21:26, 23 May 2011 | DNA.jpg (file) |  |
5 KB | Stonybrook | 2 | |
| 21:28, 23 May 2011 | DNA.png (file) |  |
5 KB | Stonybrook | 1 | |
| 15:36, 1 June 2011 | Joe allen email.png (file) |  |
7 KB | Stonybrook | 1 | |
| 11:50, 15 June 2011 | Brian email.png (file) |  |
7 KB | Stonybrook | 1 | |
| 12:54, 21 July 2011 | Pbc overlap.jpg (file) |  |
55 KB | Stonybrook | 2 | |
| 13:22, 21 July 2011 | Ubq sol.jpg (file) |  |
79 KB | Stonybrook | 2 |
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