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Date Name Thumbnail Size User Description Versions
15:14, 16 March 2024 1ndv-ligand-with-H.png (file) 114 KB Stonybrook   1
16:46, 16 March 2024 1ndv-min.png (file) 119 KB Stonybrook   1
17:08, 16 March 2024 1ndv-rigid.png (file) 352 KB Stonybrook   1
17:19, 16 March 2024 1ndv-ligand-flex.png (file) 113 KB Stonybrook   1
21:10, 16 March 2024 2ito missingloop.png (file) 107 KB Stonybrook   1
00:12, 17 March 2024 2ito missingloop2.png (file) 113 KB Stonybrook   1
00:14, 17 March 2024 2ito sequences.png (file) 71 KB Stonybrook   1
00:18, 17 March 2024 2ito db.png (file) 44 KB Stonybrook   1
00:24, 17 March 2024 2ito lc.png (file) 12 KB Stonybrook   1
00:26, 17 March 2024 2ito fixed.png (file) 27 KB Stonybrook   1
00:27, 17 March 2024 2ito fixed2.png (file) 45 KB Stonybrook   1
15:00, 17 March 2024 2ito protein.png (file) 529 KB Stonybrook   1
15:03, 17 March 2024 2ito addH.png (file) 25 KB Stonybrook   1
15:24, 17 March 2024 2ito charge.png (file) 19 KB Stonybrook   1
15:42, 17 March 2024 2ito ligand chargeH.png (file) 122 KB Stonybrook   1
16:21, 17 March 2024 2ito chargesadd.png (file) 18 KB Stonybrook   1
16:53, 17 March 2024 2ito surface.png (file) 1.51 MB Stonybrook   2
16:54, 17 March 2024 2ito dms surface.png (file) 654 KB Stonybrook   1
22:45, 17 March 2024 En min tint originial cyan.png (file) 122 KB Stonybrook The 1y0x.ligand from PDB with hydrogen and charges is cyan and the newly generated and energy minimized 1y0x.lig.min.mol2 is tint. 1
23:03, 17 March 2024 1y0x footprint.png (file) 150 KB Stonybrook 1y0x_lig_footprint 1
23:36, 17 March 2024 1y0x rigid.png (file) 152 KB Stonybrook The 1y0x.lig.min_scored.mol2 is tint and the newly generated fixed.out_scored.mol2 is cyan. 1
23:39, 17 March 2024 1y0x rigid grid score.png (file) 53 KB Stonybrook Grid Score of rigid docking in case of 1y0x 1
23:55, 17 March 2024 1y0x fixed anchor.png (file) 202 KB Stonybrook The 1y0x.lig.min_scored.mol2 is cyan and the newly generated 1y0x_fixed_output_scored.mol2 is tint. 1
00:09, 18 March 2024 1y0x flex.png (file) 267 KB Stonybrook The 1y0x.lig.min_scored.mol2 is tint and the newly generated flex.out_scored.mol2 is cyan. 1
00:18, 18 March 2024 1y0x compare 3 dockings.png (file) 197 KB Stonybrook In this image: *tan is energy minimized ligand *cyan is the rigid docking *pink is the fixed anchor docking *green is the flexible docking 1
07:39, 18 March 2024 2itoSpheres and original.png (file) 527 KB Stonybrook   1
07:42, 18 March 2024 2itobindingsitespheres.png (file) 606 KB Stonybrook   1
07:44, 18 March 2024 2ito withoutspheres.png (file) 500 KB Stonybrook   1
11:29, 18 March 2024 1y0x directory.png (file) 20 KB Stonybrook   1
11:34, 18 March 2024 1y0x PDB.png (file) 223 KB Stonybrook   1
11:35, 18 March 2024 1y0x window.png (file) 32 KB Stonybrook   1
11:36, 18 March 2024 1y0x window chimera.png (file) 35 KB Stonybrook   1
11:36, 18 March 2024 1y0x overview.png (file) 363 KB Stonybrook   1
11:37, 18 March 2024 1y0x model gap.png (file) 250 KB Stonybrook   1
11:58, 18 March 2024 1y0x distance.png (file) 43 KB Stonybrook   1
12:03, 18 March 2024 1y0x modeller license.png (file) 283 KB Stonybrook   1
12:04, 18 March 2024 1y0x model loop.png (file) 51 KB Stonybrook   1
12:11, 18 March 2024 1y0x blank.png (file) 266 KB Stonybrook   1
12:17, 18 March 2024 1y0xaddh.png (file) 24 KB Stonybrook   1
12:20, 18 March 2024 1y0x hydrogen.png (file) 480 KB Stonybrook   1
12:23, 18 March 2024 1y0xaddcharge.png (file) 20 KB Stonybrook   1
12:27, 18 March 2024 1y0x ligandbefore.png (file) 137 KB Stonybrook   1
12:30, 18 March 2024 Ligand in pdb 1y0x.png (file) 38 KB Stonybrook   1
12:59, 18 March 2024 1y0xmodeled loop.png (file) 465 KB Stonybrook   1
13:06, 18 March 2024 1y0xsurface.png (file) 592 KB Stonybrook   1
13:06, 18 March 2024 1y0x all sphere.png (file) 799 KB Stonybrook   1
13:07, 18 March 2024 1y0x dms a.png (file) 426 KB Stonybrook   1
13:07, 18 March 2024 1y0x sel sphere.png (file) 362 KB Stonybrook   1
19:44, 26 April 2024 2ITO genericDenovo lowest gridscore.png (file) 98 KB Stonybrook   1
19:45, 26 April 2024 2ITO genericDeNovo ligands gridScores.png (file) 310 KB Stonybrook   1
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