Difference between revisions of "Rizzo Lab Members and Contact Information"

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|-
 
|-
 
|Rodger Tan
 
|Rodger Tan
−
||Undergraduate Student
+
||Undergraduate
 
||Test Set, benchmarking, de novo design
 
||Test Set, benchmarking, de novo design
 
||2019 - 2020
 
||2019 - 2020
Line 92: Line 92:
 
|-
 
|-
 
|Scott Laverty
 
|Scott Laverty
−
||Undergraduate Student
+
||Undergraduate
 
||DOCK6 benchmarking with Autodock4
 
||DOCK6 benchmarking with Autodock4
 
||2019 - 2020
 
||2019 - 2020
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|-
 
|-
 
|Stephen Telehany
 
|Stephen Telehany
−
||Masters Student
+
||Masters
 
||Zika Virus
 
||Zika Virus
 
||2017 - 2020
 
||2017 - 2020
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|-
 
|-
 
|Yuchen Zhou
 
|Yuchen Zhou
−
||Doctoral / Masters student
+
||PhD / Masters
 
||BoNT/E, DOCK scoring functions, FABP5
 
||BoNT/E, DOCK scoring functions, FABP5
 
||2012 - 2018
 
||2012 - 2018
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|-
 
|-
 
|Jiaye Guo
 
|Jiaye Guo
−
||Doctoral student
+
||PhD
 
||Solvated footprints, Small-molecule inhibitor for HER2
 
||Solvated footprints, Small-molecule inhibitor for HER2
 
||2013 - 2018
 
||2013 - 2018
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|-
 
|-
 
|Courtney Singleton
 
|Courtney Singleton
−
||MD / PhD Student
+
||MD/PhD
 
||HIVgp41, De novo design, genetic algorithm
 
||HIVgp41, De novo design, genetic algorithm
 
||2014 - 2018
 
||2014 - 2018
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|-
 
|-
 
|Dwight McGee
 
|Dwight McGee
−
||Postdoctoral Researcher
+
||Postdoc
 
||HIVgp41, Free energy calculations, de novo design
 
||HIVgp41, Free energy calculations, de novo design
 
||2015 - 2018
 
||2015 - 2018
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|-
 
|-
 
|Brian Fochtman
 
|Brian Fochtman
−
||Doctoral student
+
||PhD
 
||HIVgp41, DOCK development
 
||HIVgp41, DOCK development
 
||2011 - 2017
 
||2011 - 2017
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|-
 
|-
 
|Lingling Jiang
 
|Lingling Jiang
−
||Doctoral Student
+
||PhD
 
||HIVgp41, Pharmacophore modeling
 
||HIVgp41, Pharmacophore modeling
 
||2010 - 2015
 
||2010 - 2015
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|-
 
|-
 
|Brian Ralph
 
|Brian Ralph
−
||Undergraduate student
+
||Undergraduate
 
||Fatty acid binding protein, De novo design
 
||Fatty acid binding protein, De novo design
 
||2013 - 2015
 
||2013 - 2015
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|-
 
|-
 
|William J. Allen
 
|William J. Allen
−
||Postdoctoral fellow
+
||Postdoc
 
||HIVgp41, DOCK development
 
||HIVgp41, DOCK development
 
||2011 - 2015
 
||2011 - 2015
Line 152: Line 152:
 
|-
 
|-
 
|Yulin Huang
 
|Yulin Huang
−
||Doctoral student
+
||PhD
 
||EGFR, IGF-IR
 
||EGFR, IGF-IR
 
||2008 - 2013
 
||2008 - 2013
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|-
 
|-
 
|Sudipto Mukherjee
 
|Sudipto Mukherjee
−
||Doctoral / Masters student
+
||PhD / Masters
 
||DOCK development, HIVgp41
 
||DOCK development, HIVgp41
 
||2005 - 2012
 
||2005 - 2012
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|-
 
|-
 
|[http://docking.org/~tbalius/ Trent E. Balius]
 
|[http://docking.org/~tbalius/ Trent E. Balius]
−
||Doctoral student
+
||PhD
 
||EGFR, HIVgp41, DOCK development
 
||EGFR, HIVgp41, DOCK development
 
||2007 - 2012
 
||2007 - 2012
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|-
 
|-
 
|Patrick Holden
 
|Patrick Holden
−
||patrick.m.holden [at] gmail [dot] com
+
||Masters
 
||HIVgp41
 
||HIVgp41
 
||2009 - 2011
 
||2009 - 2011
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|-
 
|-
 
| Jibril Ashiru-Balogun
 
| Jibril Ashiru-Balogun
−
||Undergraduate student
+
||Undergraduate
 
||HIVgp41
 
||HIVgp41
 
||2010 - 2011
 
||2010 - 2011
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|-
 
|-
 
| Brian Shea
 
| Brian Shea
−
||Undergraduate student
+
||Undergraduate
 
||Kinases  
 
||Kinases  
 
||2010
 
||2010
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|-
 
|-
 
| Patrick Murphy
 
| Patrick Murphy
−
||Undergraduate student
+
||Undergraduate
 
||Influenza  
 
||Influenza  
 
||2009 - 2010
 
||2009 - 2010
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|-
 
|-
 
| Rashi Goyal
 
| Rashi Goyal
−
||Masters student
+
||Masters
 
||Influenza, HIV  
 
||Influenza, HIV  
 
||2007 - 2010
 
||2007 - 2010
Line 200: Line 200:
 
|-
 
|-
 
| Brian McGillick
 
| Brian McGillick
−
||Masters student
+
||Masters
 
||HIVgp41
 
||HIVgp41
 
||2007 - 2010
 
||2007 - 2010
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|-
 
|-
 
| Kenneth Ascher
 
| Kenneth Ascher
−
||Undergraduate student
+
||Undergraduate
 
||DOCK method development
 
||DOCK method development
 
||2009 - 2010
 
||2009 - 2010
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|-
 
|-
 
| Dimir Abrar
 
| Dimir Abrar
−
||Undergraduate student
+
||Undergraduate
 
||HIVRT crossdocking
 
||HIVRT crossdocking
 
||2008 - 2009
 
||2008 - 2009
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|-
 
|-
 
| Chetan Raj Rupakheti
 
| Chetan Raj Rupakheti
−
||Summer student
+
||Summer
 
||HIVgp41
 
||HIVgp41
 
||2008
 
||2008
Line 230: Line 230:
 
|-
 
|-
 
| Noel Carrascal
 
| Noel Carrascal
−
||Doctoral student
+
||PhD (co-advisor)
 
||DOCK method development
 
||DOCK method development
 
||2005 - 2007
 
||2005 - 2007
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|-
 
|-
 
| Ricky Chachra
 
| Ricky Chachra
−
||Undergraduate student
+
||Undergraduate
 
||Influenza drug resistance
 
||Influenza drug resistance
 
||2005 - 2007
 
||2005 - 2007
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|-
 
|-
 
| Amee Patel
 
| Amee Patel
−
||Undergraduate student
+
||Undergraduate
 
||Testset development
 
||Testset development
 
||2005 - 2007
 
||2005 - 2007

Revision as of 14:58, 5 November 2020

CONTACT

Robert C. Rizzo

Stony Brook University

Department of Applied Mathematics and Statistics

Office: Math Tower 1-111

Lab: Math Tower 3-129

Stony Brook, NY 11794-3600

Email: rizzorc [at] gmail [dot] com

Office: (631) 632-9340

Lab: (631) 632-8519

Fax: (631) 632-8490

Website: rizzolab.org

Wiki: ringo.ams.sunysb.edu

Current 2019 Rizzo Lab Members: from left to right Stephen, Guilherme, Rodger, Rob, Chris, John, Scott, and Lauren

CURRENT MEMBERS

Name E-mail Status Project Year
Dr. Robert C. Rizzo rizzorc [at] gmail [dot] com Principal investigator Group leader 2004 - present
Guilherme Duarte Ramos Matos Guilherme.duarteramosmatos [at] stonybrook [dot] edu Postdoctoral Researcher Cheminformatics integration, COVID-19 2019 - present
Lauren Prentis lauren.prentis [at] stonybrook [dot] edu Doctoral Student Tsg101, de novo design, covalent docking, genetic algorithm 2016 - present
John Bickel john.bickel [at] stonybrook [dot] edu Doctoral Student de novo design, COVID-19 2019 - present
Christopher Corbo christopher.corbo [at] stonybrook [dot] edu Doctoral Student Test Set benchmarking, COVID-19 2019 - present
Steven Pak steven.pak [at] stonybrook [dot] edu Doctoral Student de novo design, FGFR2, Cheminformatics 2020 - present

FORMER MEMBERS

Name Status Project Year New Position
Rodger Tan Undergraduate Test Set, benchmarking, de novo design 2019 - 2020 --
Scott Laverty Undergraduate DOCK6 benchmarking with Autodock4 2019 - 2020 UPenn Chemistry Doctoral Program
Stephen Telehany Masters Zika Virus 2017 - 2020 --
Yuchen Zhou PhD / Masters BoNT/E, DOCK scoring functions, FABP5 2012 - 2018 Postdoc, Filizola Lab at ISMMS
Jiaye Guo PhD Solvated footprints, Small-molecule inhibitor for HER2 2013 - 2018 Postdoc, Chodera Lab at MSKCC
Courtney Singleton MD/PhD HIVgp41, De novo design, genetic algorithm 2014 - 2018 Stony Brook Medical School
Dwight McGee Postdoc HIVgp41, Free energy calculations, de novo design 2015 - 2018 Silicon Therapeutics
Brian Fochtman PhD HIVgp41, DOCK development 2011 - 2017 The FDA
Lingling Jiang PhD HIVgp41, Pharmacophore modeling 2010 - 2015 Novo Nordisk
Brian Ralph Undergraduate Fatty acid binding protein, De novo design 2013 - 2015 Dental school
William J. Allen Postdoc HIVgp41, DOCK development 2011 - 2015 TACC
Yulin Huang PhD EGFR, IGF-IR 2008 - 2013 Wall Street
Sudipto Mukherjee PhD / Masters DOCK development, HIVgp41 2005 - 2012 Postdoc, Voelz Lab
Trent E. Balius PhD EGFR, HIVgp41, DOCK development 2007 - 2012 Project Lead, RAS Computational Chemistry Team in the Cancer Research Tecnhology Program (CRTP) at the Frederick National Lab for Cancer Research
Patrick Holden Masters HIVgp41 2009 - 2011 --
Jibril Ashiru-Balogun Undergraduate HIVgp41 2010 - 2011 --
Brian Shea Undergraduate Kinases 2010 --
Patrick Murphy Undergraduate Influenza 2009 - 2010 --
Rashi Goyal Masters Influenza, HIV 2007 - 2010 --
Brian McGillick Masters HIVgp41 2007 - 2010 --
Kenneth Ascher Undergraduate DOCK method development 2009 - 2010 --
Dimir Abrar Undergraduate HIVRT crossdocking 2008 - 2009 --
Chetan Raj Rupakheti Summer HIVgp41 2008 --
Bentley Strockbine Postdoc HIVgp41 2005 - 2007 --
Noel Carrascal PhD (co-advisor) DOCK method development 2005 - 2007 --
Ricky Chachra Undergraduate Influenza drug resistance 2005 - 2007 --
Amee Patel Undergraduate Testset development 2005 - 2007 --
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