Difference between revisions of "Rizzo Lab Downloads"
From Rizzo_Lab
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== SB2010 Protein Families [2010.05.19 Initial Release] == | == SB2010 Protein Families [2010.05.19 Initial Release] == | ||
− | {| border="1" cellpadding=" | + | {| border="1" cellpadding="3" cellspacing="0" style="background:white; text-align:left; width:30%" |
|- style="background:lightblue; width:10%" | |- style="background:lightblue; width:10%" | ||
− | ! style="width: | + | ! style="width:30%" !| Protein Family |
− | ! style="width:10%" !|Size | + | ! style="width:10%" !| Size |
|- | |- | ||
| [http://george.ams.sunysb.edu/SB2010/families.large/REVERSE_TRANSCRIPTASE HIV RT] | | [http://george.ams.sunysb.edu/SB2010/families.large/REVERSE_TRANSCRIPTASE HIV RT] |
Revision as of 15:55, 20 July 2010
SB2010 Docking Database [2010.05.19 Initial Release]
Resource | Filename |
---|---|
Receptors, Ligands and Spheres | SB2010.05.19_rec.lig.sph.tar.gz |
Energy and Bump Grids | To be released |
Alternate Ligand Charge Models | To be released |
Aligned Protein Families | To be released |
Flexible Docked Ensembles | To be released |
Best Flex Docked Poses | To be released |
DOCK Sample Inputs | RGD FAD FLX |
Flexibility Subset Lists | 7orless 8to15 15+ all |
SB2010 Protein Families [2010.05.19 Initial Release]
Protein Family | Size |
---|---|
HIV RT | 21 |
Factor Xa | 41 |
Neuraminidase | 43 |
Sialidase | 11 |
Ribonuclease T1 | 7 |
OMP Decarboxylase | 7 |
Estrogen Receptor | 45 |
T4 Lysozyme | 13 |
Beta Trypsin | 29 |
Streptavidin | 8 |
Thrombin | 37 |
Tyrosine Phosphatase | 20 |
HMG COA Reductase | 20 |
Ribonuclease A | 14 |
Alpha Trypsin | 46 |
COX | 7 |
Acetylcholinesterase | 19 |
HIV Protease | 60 |
Thermolysin | 26 |
Carboxypeptidase A | 8 |
Matrix Metalloprotease | 14 |
Egg Lysozyme | 14 |
Phospholipase A2 | 15 |
Thymidylate Synthase | 12 |
Carbonic Anhydrase | 29 |