Difference between revisions of "Analysis Tools Repository"

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= Using this repository =
 
= Using this repository =
  
= How to update this repository =
+
=== What is here ===
 +
===How to update this repository ===
  
 
= Analyses =
 
= Analyses =
  
 
=== RMSD - Molecular Dynamics ===
 
=== RMSD - Molecular Dynamics ===

Revision as of 12:17, 7 January 2020

This is intended to be the one-stop-shop for analysis tools and scripts for the lab.

See below for the intended list of things to be added (LastAdded: 01/07/2020 JDB)

  • MMGBSA - execution and analysis
  • Footprinting with amber
  • Multifootprint with dock
  • ACF - BASEM
  • Making 2D structures (JMOL, MarvinSketch)
  • Sequence alignments
  • Test set statistics
  • VS Protocol (small description, + GH link)
  • MOE inputs, descriptions, files, scripts?

Using this repository

What is here

How to update this repository

Analyses

RMSD - Molecular Dynamics