Difference between revisions of "Rizzo Lab Members and Contact Information"

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||2005 - 2007
 
||2005 - 2007
 
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|Rodger Tan
 
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||Undergraduate
 
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||Test Set, benchmarking, de novo design
 
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||2019 - 2020
 
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|| --
 
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|Scott Laverty
 
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||Undergraduate
 
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||DOCK6 benchmarking with Autodock4
 
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||2019 - 2020
 
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||UPenn Chemistry Doctoral Program
 
 
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|- style="background:lightgreen"
 
|- style="background:lightgreen"
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! style="width:10%" !|Year
 
! style="width:10%" !|Year
 
! style="width:20%" !|Position
 
! style="width:20%" !|Position
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|Stephen Telehany
 
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||Masters
 
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||Zika Virus
 
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||2017 - 2020
 
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|| --
 
 
|-
 
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|Yuchen Zhou
 
|Yuchen Zhou
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||2014 - 2018
 
||2014 - 2018
 
||Stony Brook Medical School
 
||Stony Brook Medical School
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|-
 
|-
 
|Brian Fochtman
 
|Brian Fochtman
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||2011 - 2017
 
||2011 - 2017
 
||The FDA
 
||The FDA
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|-
 
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|- style="background:lightgreen"
 
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! style="width:20%" !|FORMER MASTERS STUDENTS
 
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! style="width:20%" !|Status
 
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! style="width:20%" !|Project
 
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! style="width:10%" !|Year
 
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! style="width:20%" !|Position
 
 
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|Lingling Jiang
 
|Lingling Jiang
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||2010 - 2015
 
||2010 - 2015
 
||Novo Nordisk
 
||Novo Nordisk
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|Brian Ralph
 
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||Undergraduate
 
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||Fatty acid binding protein, De novo design
 
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||2013 - 2015
 
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||Dental school
 
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|Yulin Huang
 
|Yulin Huang
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||2007 - 2012
 
||2007 - 2012
 
||Project Lead, RAS Computational Chemistry Team in the Cancer Research Tecnhology Program (CRTP) at the [https://frederick.cancer.gov/ Frederick National Lab for Cancer Research]
 
||Project Lead, RAS Computational Chemistry Team in the Cancer Research Tecnhology Program (CRTP) at the [https://frederick.cancer.gov/ Frederick National Lab for Cancer Research]
 +
|-
 +
| Noel Carrascal
 +
||PhD (co-advisor)
 +
||DOCK method development
 +
||2005 - 2007
 +
|| --
 
|-
 
|-
 
|- style="background:lightgreen"
 
|- style="background:lightgreen"
−
! style="width:20%" !|FORMER UNDERGRADUATE STUDENTS
+
! style="width:20%" !|FORMER MASTERS STUDENTS
 
! style="width:20%" !|Status
 
! style="width:20%" !|Status
 
! style="width:20%" !|Project
 
! style="width:20%" !|Project
 
! style="width:10%" !|Year
 
! style="width:10%" !|Year
 
! style="width:20%" !|Position
 
! style="width:20%" !|Position
 +
|-
 +
|Stephen Telehany
 +
||Masters
 +
||Zika Virus
 +
||2017 - 2020
 +
|| --
 
|-
 
|-
 
|Patrick Holden
 
|Patrick Holden
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||2009 - 2011
 
||2009 - 2011
 
|| --
 
|| --
 +
|-
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| Rashi Goyal
 +
||Masters
 +
||Influenza, HIV
 +
||2007 - 2010
 +
|| --
 +
|-
 +
| Brian McGillick
 +
||Masters
 +
||HIVgp41
 +
||2007 - 2010
 +
|| --
 +
|-
 +
|- style="background:lightgreen"
 +
! style="width:20%" !|FORMER UNDERGRADUATE STUDENTS
 +
! style="width:20%" !|Status
 +
! style="width:20%" !|Project
 +
! style="width:10%" !|Year
 +
! style="width:20%" !|Position
 +
|-
 +
|Rodger Tan
 +
||Undergraduate
 +
||Test Set, benchmarking, de novo design
 +
||2019 - 2020
 +
|| --
 +
|-
 +
|Scott Laverty
 +
||Undergraduate
 +
||DOCK6 benchmarking with Autodock4
 +
||2019 - 2020
 +
||UPenn Chemistry Doctoral Program
 +
|-
 +
|Brian Ralph
 +
||Undergraduate
 +
||Fatty acid binding protein, De novo design
 +
||2013 - 2015
 +
||Dental school
 
|-
 
|-
 
| Jibril Ashiru-Balogun
 
| Jibril Ashiru-Balogun
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||Influenza  
 
||Influenza  
 
||2009 - 2010
 
||2009 - 2010
−
|| --
 
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|-
 
−
|- style="background:lightgreen"
 
−
! style="width:20%" !|FORMER HIGH SCHOOL STUDENTS
 
−
! style="width:20%" !|Status
 
−
! style="width:20%" !|Project
 
−
! style="width:10%" !|Year
 
−
! style="width:20%" !|Position
 
−
|-
 
−
| Rashi Goyal
 
−
||Masters
 
−
||Influenza, HIV
 
−
||2007 - 2010
 
−
|| --
 
−
|-
 
−
| Brian McGillick
 
−
||Masters
 
−
||HIVgp41
 
−
||2007 - 2010
 
 
|| --
 
|| --
 
|-
 
|-
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||HIVgp41
 
||HIVgp41
 
||2008
 
||2008
−
|| --
 
−
 
−
|-
 
−
| Noel Carrascal
 
−
||PhD (co-advisor)
 
−
||DOCK method development
 
−
||2005 - 2007
 
 
|| --
 
|| --
 
|-
 
|-
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||Testset development
 
||Testset development
 
||2005 - 2007
 
||2005 - 2007
 +
|| --
 +
|-
 +
|- style="background:lightgreen"
 +
! style="width:20%" !|FORMER HIGH SCHOOL STUDENTS
 +
! style="width:20%" !|Status
 +
! style="width:20%" !|Project
 +
! style="width:10%" !|Year
 +
! style="width:20%" !|Position
 +
|-
 +
| Araya Glenn
 +
||High School Student
 +
||Alzheimer’s disease, DOCKing
 +
||2019 - 2020
 
|| --
 
|| --
 
|-
 
|-
 
|}
 
|}

Revision as of 15:43, 5 November 2020

CONTACT

Robert C. Rizzo

Stony Brook University

Department of Applied Mathematics and Statistics

Office: Math Tower 1-111

Lab: Math Tower 3-129

Stony Brook, NY 11794-3600

Email: rizzorc [at] gmail [dot] com

Office: (631) 632-9340

Lab: (631) 632-8519

Fax: (631) 632-8490

Website: rizzolab.org

Wiki: ringo.ams.sunysb.edu


Current 2019 Rizzo Lab Members: from left to right Stephen, Guilherme, Rodger, Rob, Chris, John, Scott, and Lauren

RIZZO LAB

CURRENT Status Project Year Email
Dr. Robert C. Rizzo Principle Investigator Group leader 2004 - present rizzorc [at] gmail [dot] com
Guilherme Duarte Ramos Matos Postdoctoral Cheminformatics integration, COVID-19 2019 - present Guilherme.duarteramosmatos [at] stonybrook [dot] edu
Lauren Prentis Graduate Student Tsg101, de novo design, covalent docking, genetic algorithm 2016 - present lauren.prentis [at] stonybrook [dot] edu
John Bickel Graduate Student de novo design, COVID-19 2019 - present john.bickel [at] stonybrook [dot] edu
Christopher Corbo Graduate Student Test Set benchmarking, COVID-19 2019 - present christopher.corbo [at] stonybrook [dot] edu
Steven Pak Graduate Student de novo design, FGFR2, Cheminformatics 2020 - present steven.pak [at] stonybrook [dot] edu
FORMER POSTDOCS Status Project Year Position
Dwight McGee Postdoctoral HIVgp41, Free energy calculations, de novo design 2015 - 2018 Silicon Therapeutics
William J. Allen Postdoctoral HIVgp41, DOCK development 2011 - 2015 TACC
Bentley Strockbine Postdoctoral HIVgp41 2005 - 2007 --
FORMER PHD STUDENTS Status Project Year Position
Yuchen Zhou PhD / Masters BoNT/E, DOCK scoring functions, FABP5 2012 - 2018 Postdoc, Filizola Lab at ISMMS
Jiaye Guo PhD Solvated footprints, Small-molecule inhibitor for HER2 2013 - 2018 Postdoctoral, Chodera Lab at MSKCC
Courtney Singleton MD / PhD HIVgp41, De novo design, genetic algorithm 2014 - 2018 Stony Brook Medical School
Brian Fochtman PhD HIVgp41, DOCK development 2011 - 2017 The FDA
Lingling Jiang PhD HIVgp41, Pharmacophore modeling 2010 - 2015 Novo Nordisk
Yulin Huang PhD EGFR, IGF-IR 2008 - 2013 Wall Street
Sudipto Mukherjee PhD / Masters DOCK development, HIVgp41 2005 - 2012 Postdoc, Voelz Lab
Trent E. Balius PhD EGFR, HIVgp41, DOCK development 2007 - 2012 Project Lead, RAS Computational Chemistry Team in the Cancer Research Tecnhology Program (CRTP) at the Frederick National Lab for Cancer Research
Noel Carrascal PhD (co-advisor) DOCK method development 2005 - 2007 --
FORMER MASTERS STUDENTS Status Project Year Position
Stephen Telehany Masters Zika Virus 2017 - 2020 --
Patrick Holden Masters HIVgp41 2009 - 2011 --
Rashi Goyal Masters Influenza, HIV 2007 - 2010 --
Brian McGillick Masters HIVgp41 2007 - 2010 --
FORMER UNDERGRADUATE STUDENTS Status Project Year Position
Rodger Tan Undergraduate Test Set, benchmarking, de novo design 2019 - 2020 --
Scott Laverty Undergraduate DOCK6 benchmarking with Autodock4 2019 - 2020 UPenn Chemistry Doctoral Program
Brian Ralph Undergraduate Fatty acid binding protein, De novo design 2013 - 2015 Dental school
Jibril Ashiru-Balogun Undergraduate HIVgp41 2010 - 2011 --
Brian Shea Undergraduate Kinases 2010 --
Patrick Murphy Undergraduate Influenza 2009 - 2010 --
Kenneth Ascher Undergraduate DOCK method development 2009 - 2010 --
Dimir Abrar Undergraduate HIVRT crossdocking 2008 - 2009 --
Chetan Raj Rupakheti Summer HIVgp41 2008 --
Ricky Chachra Undergraduate Influenza drug resistance 2005 - 2007 --
Amee Patel Undergraduate Testset development 2005 - 2007 --
FORMER HIGH SCHOOL STUDENTS Status Project Year Position
Araya Glenn High School Student Alzheimer’s disease, DOCKing 2019 - 2020 --
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