Difference between revisions of "2022 DOCK tutorial 3 with PDBID 1X70"
From Rizzo_Lab
BrockBoysan (talk | contribs) (→Spheres) |
BrockBoysan (talk | contribs) (→Spheres) |
||
| Line 15: | Line 15: | ||
| − | [[File: | + | [[File:1X70_surface.png|thumb|center|800px]The VDW surface for 1X70 that will be used to generate the sphere files.] |
'''placeholder 0''' | '''placeholder 0''' | ||
| − | [[File:1X70_spheres.png|thumb|center| | + | [[File:1X70_spheres.png|thumb|center|800px|The spheres representing the empty space within the protein.]] |
Revision as of 15:20, 28 February 2022
Contents
Introduction
DOCK
System Preparation
Fetching 1X70 Open Chimera: File > Fetch By Id > 1X70
Spheres
Surface Generation
[[File:1X70_surface.png|thumb|center|800px]The VDW surface for 1X70 that will be used to generate the sphere files.]
placeholder 0
placeholder
Making The Infamous Grid
Making the grid
Energy Minimization for the ligand
File:Placeholder
Placeholder Text
Docking & Virtual Screening
Rigid Docking
File:Placeholder.png
placeholder text
Fixed Anchor Docking
File:Place holder.png
there is no figure here
Flexible Docking
File:.png
placeholder text
Placeholder
[[File:|thumb|center|800px|image placeholder]]
Placeholder
Placeholder
File:Mpi minimized.png
the image shows
