Difference between revisions of "Tutorials"

From Rizzo_Lab
Jump to: navigation, search
Line 5: Line 5:
 
*[[DOCK_CV Tutorials]] - Covalent Docking  
 
*[[DOCK_CV Tutorials]] - Covalent Docking  
 
*[[DOCK_GA Tutorials]] - Genetic Algorithm
 
*[[DOCK_GA Tutorials]] - Genetic Algorithm
*[[Pose Reproduction Tutorial]] - Pose Reproduction Tutorial
+
*[[Pose Reproduction Tutorial]] - Pose Reproduction Tutorial (SOP for Rizzo Lab members)
*[[Cross Docking Tutorial]] - Cross Docking Tutorial
+
*[[Cross Docking Tutorial]] - Cross Docking Tutorial (SOP for Rizzo Lab members)
*[[Ligand Enrichment Tutorial]] - Ligand Enrichment Tutorial
+
*[[Ligand Enrichment Tutorial]] - Ligand Enrichment Tutorial (SOP for Rizzo Lab members)
*[[Test Set Tutorial V1]] - Test Set Tutorial V1 (How to build or rebuild test sets with Rizzo Lab protocols)
+
*[[Test Set Tutorial V1]] - Test Set Tutorial V1 (SOP for (re)building test sets for Rizzo Lab members)
 
|}
 
|}
  

Revision as of 16:31, 27 February 2024

Disclaimer: The VS and DN tutorials are written by students learning to use dock in a classroom setting. A new dock tutorial is created every year collaboratively by students in the AMS 536 class. All the tutorials follow a similar progression, but are built around different protein-ligand complexes from the PDB.

Some of the input files may have been modified to reduce runtime in order to work well in a classroom setting. For production work, please consult the current DOCK Manual for details.