Difference between revisions of "2010 AMBER Tutorial with Biotin and Streptavidin"
From Rizzo_Lab
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| − | = | + | =What is AMBER?= |
| − | + | [http://ambermd.org/ Amber] - '''A'''ssisted '''M'''odel '''B'''uilding with '''E'''nergy '''R'''efinement - is a suite of programs that can be used to simulate and analyze macromolecular systems such as proteins dissolved in water at physiological conditions. | |
| − | + | The [http://ringo.ams.sunysb.edu/img_auth.php/c/cb/Amber10i-1-_-_Manual.pdf Amber 10 Manual] is the primary resource when trying to learn what variables and keywords mean and what they do. Using Adobe Acrobat to view the file, you can simply search the document for keywords, which saves much time. | |
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| − | The [http://ringo.ams.sunysb.edu/img_auth.php/c/cb/Amber10i-1-_-_Manual.pdf Amber 10 Manual] is the primary resource when trying to learn what variables and keywords mean | ||
There is a [http://lists.ambermd.org/mailman/listinfo/amber mailing list] you could sign-up for, as an additional resource. | There is a [http://lists.ambermd.org/mailman/listinfo/amber mailing list] you could sign-up for, as an additional resource. | ||
Revision as of 20:08, 18 February 2010
What is AMBER?
Amber - Assisted Model Building with Energy Refinement - is a suite of programs that can be used to simulate and analyze macromolecular systems such as proteins dissolved in water at physiological conditions.
The Amber 10 Manual is the primary resource when trying to learn what variables and keywords mean and what they do. Using Adobe Acrobat to view the file, you can simply search the document for keywords, which saves much time.
There is a mailing list you could sign-up for, as an additional resource.
Biotin Notes
Download PDB Here and view it's details Here.
