2017 Dock tutorial

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For additional Rizzo Lab tutorials see DOCK Tutorials. Use this link Wiki Formatting as a reference for editing the wiki. This tutorial was developed collaboratively by a subsection of the AMS 536 class of 2017, using DOCK v6.8.

I. Introduction

II. Preparing the Receptor and Ligand

III. Generating Receptor Surface and Spheres

IV. Generating Box and Grid

V. Docking a Single Molecule for Pose Reproduction

VI. Virtual Screening

VIII. Frequently Encountered Problems

Retrieved from "https://ringo.ams.stonybrook.edu/index.php?title=2017_Dock_tutorial&oldid=10109"