2022 DOCK tutorial 3 with PDBID 1X70

From Rizzo_Lab
Revision as of 15:20, 28 February 2022 by BrockBoysan (talk | contribs) (Spheres)
Jump to: navigation, search

Introduction

DOCK

System Preparation

Fetching 1X70 Open Chimera: File > Fetch By Id > 1X70

Spheres

Surface Generation


The VDW surface for 1X70 that will be used to generate the sphere files.


placeholder 0

The spheres representing the empty space within the protein.


placeholder

Making The Infamous Grid

Making the grid

Energy Minimization for the ligand

File:Placeholder
Placeholder Text

Docking & Virtual Screening

Rigid Docking

File:Placeholder.png
placeholder text

Fixed Anchor Docking

File:Place holder.png
there is no figure here

Flexible Docking

File:.png
placeholder text

Placeholder

[[File:|thumb|center|800px|image placeholder]]

Placeholder

Placeholder

File:Mpi minimized.png
the image shows

placeholder