User contributions
(Latest | Earliest) View (newer 50) (older 50) (20 | 50 | 100 | 250 | 500).
- 07:48, 18 March 2024 (diff | hist) . . (-107) . . 2024 DOCK tutorial 1 with PDBID 2ITO (→Preparing the Protein file)
- 07:44, 18 March 2024 (diff | hist) . . (+9) . . 2024 DOCK tutorial 1 with PDBID 2ITO (→Binding Site Spheres)
- 07:44, 18 March 2024 (diff | hist) . . (0) . . N File:2ito withoutspheres.png (top)
- 07:42, 18 March 2024 (diff | hist) . . (0) . . N File:2itobindingsitespheres.png (top)
- 07:40, 18 March 2024 (diff | hist) . . (+4) . . 2024 DOCK tutorial 1 with PDBID 2ITO (→Generating Spheres for the Binding Site)
- 07:39, 18 March 2024 (diff | hist) . . (0) . . N File:2itoSpheres and original.png (top)
- 00:36, 18 March 2024 (diff | hist) . . (+227) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Rescoring and Ranking Virtually Screened Molecules)
- 00:34, 18 March 2024 (diff | hist) . . (+244) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Cartesian Minimization of Virtually Screened Small Molecules)
- 00:33, 18 March 2024 (diff | hist) . . (0) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Cartesian Minimization of Virtually Screened Small Molecules)
- 00:33, 18 March 2024 (diff | hist) . . (+44) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Cartesian Minimization of Virtually Screened Small Molecules)
- 00:32, 18 March 2024 (diff | hist) . . (+4,061) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Cartesian Minimization of Virtually Screened Small Molecules)
- 00:27, 18 March 2024 (diff | hist) . . (+6,628) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Virtual Screening of a Ligand Library)
- 00:19, 18 March 2024 (diff | hist) . . (+13) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Flexible Docking)
- 00:19, 18 March 2024 (diff | hist) . . (+598) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Flexible Docking)
- 00:18, 18 March 2024 (diff | hist) . . (+138) . . N File:1y0x compare 3 dockings.png (In this image: *tan is energy minimized ligand *cyan is the rigid docking *pink is the fixed anchor docking *green is the flexible docking) (top)
- 00:10, 18 March 2024 (diff | hist) . . (+5,593) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Flexible Docking)
- 00:09, 18 March 2024 (diff | hist) . . (+90) . . N File:1y0x flex.png (The 1y0x.lig.min_scored.mol2 is tint and the newly generated flex.out_scored.mol2 is cyan.) (top)
- 23:59, 17 March 2024 (diff | hist) . . (-3) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Fixed Anchor Docking)
- 23:58, 17 March 2024 (diff | hist) . . (+6,093) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→DOCK)
- 23:55, 17 March 2024 (diff | hist) . . (+99) . . N File:1y0x fixed anchor.png (The 1y0x.lig.min_scored.mol2 is cyan and the newly generated 1y0x_fixed_output_scored.mol2 is tint.) (top)
- 23:45, 17 March 2024 (diff | hist) . . (+414) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Introduction)
- 23:40, 17 March 2024 (diff | hist) . . (+349) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Rigid Docking)
- 23:39, 17 March 2024 (diff | hist) . . (+43) . . N File:1y0x rigid grid score.png (Grid Score of rigid docking in case of 1y0x) (top)
- 23:37, 17 March 2024 (diff | hist) . . (+738) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Rigid Docking)
- 23:36, 17 March 2024 (diff | hist) . . (+91) . . N File:1y0x rigid.png (The 1y0x.lig.min_scored.mol2 is tint and the newly generated fixed.out_scored.mol2 is cyan.) (top)
- 23:27, 17 March 2024 (diff | hist) . . (+211) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Introduction)
- 23:24, 17 March 2024 (diff | hist) . . (+77) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Rigid Docking)
- 23:22, 17 March 2024 (diff | hist) . . (+5,101) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→DOCK)
- 23:05, 17 March 2024 (diff | hist) . . (+6) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Footprint Analysis)
- 23:04, 17 March 2024 (diff | hist) . . (+35) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Footprint Analysis)
- 23:03, 17 March 2024 (diff | hist) . . (+18) . . N File:1y0x footprint.png (1y0x_lig_footprint) (top)
- 23:01, 17 March 2024 (diff | hist) . . (+995) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Footprint Analysis)
- 22:55, 17 March 2024 (diff | hist) . . (+3,703) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Footprint Analysis)
- 22:52, 17 March 2024 (diff | hist) . . (+13) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Ligand Minimization)
- 22:51, 17 March 2024 (diff | hist) . . (+132) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Ligand Minimization)
- 22:49, 17 March 2024 (diff | hist) . . (+40) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Ligand Minimization)
- 22:45, 17 March 2024 (diff | hist) . . (+130) . . N File:En min tint originial cyan.png (The 1y0x.ligand from PDB with hydrogen and charges is cyan and the newly generated and energy minimized 1y0x.lig.min.mol2 is tint.) (top)
- 22:40, 17 March 2024 (diff | hist) . . (+4,084) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Energy Minimization)
- 22:31, 17 March 2024 (diff | hist) . . (+3,061) . . 2024 DOCK tutorial 3 with PDBID 1Y0X (→Box and Grid Generation)
- 22:11, 17 March 2024 (diff | hist) . . (+2,678) . . 2024 DOCK tutorial 3 with PDBID 1Y0X
- 16:56, 17 March 2024 (diff | hist) . . (-1) . . 2024 DOCK tutorial 1 with PDBID 2ITO (→Creating the Protein Binding Site Surface)
- 16:54, 17 March 2024 (diff | hist) . . (0) . . N File:2ito dms surface.png (top)
- 16:53, 17 March 2024 (diff | hist) . . (0) . . File:2ito surface.png (Stonybrook uploaded a new version of File:2ito surface.png) (top)
- 16:53, 17 March 2024 (diff | hist) . . (0) . . N File:2ito surface.png
- 16:38, 17 March 2024 (diff | hist) . . (+4,208) . . 2024 DOCK tutorial 1 with PDBID 2ITO (→Creating the Protein Binding Site Surface)
- 16:33, 17 March 2024 (diff | hist) . . (+263) . . 2024 DOCK tutorial 1 with PDBID 2ITO (→Final Steps)
- 16:24, 17 March 2024 (diff | hist) . . (-3,007) . . 2024 DOCK tutorial 1 with PDBID 2ITO (→Preparing the Ligand File)
- 16:21, 17 March 2024 (diff | hist) . . (0) . . N File:2ito chargesadd.png (top)
- 15:47, 17 March 2024 (diff | hist) . . (+4,610) . . 2024 DOCK tutorial 1 with PDBID 2ITO (→Preparing the Ligand File)
- 15:42, 17 March 2024 (diff | hist) . . (0) . . N File:2ito ligand chargeH.png (top)
(Latest | Earliest) View (newer 50) (older 50) (20 | 50 | 100 | 250 | 500).
