ZINC15 Database

From Rizzo_Lab
Revision as of 16:47, 22 November 2016 by Jiaye (talk | contribs) (How to download molecules by catalog?)
Jump to: navigation, search

The ZINC15 database is an updated version of ZINC12 and contains over 100 million purchasable compounds for virtual screening.

How to download molecules by catalog?

For zinc 15 it is recommended that we download small-molecule libraries across different vendors with user-specified properties (e.g. pH, formal charge, purchasability) using the "tranche browser" tool.


A general stepwise instruction can be found at Download by catalog

If you would like to download compounds from ChemDiv, The ZINC ID mapping:

http://files.docking.org/catalogs/50/cdiv/cdiv-zinc.txt.gz

The lead-like tranche:

http://files.docking.org/catalogs/50/cdiv/lead-like.tgz

Ref: reference models (dominate form at pH7.4) Mid: additional forms present at pH7.4

References