Amber on Seawulf (compilation)
From Rizzo_Lab
compiling Amber9
Follow the steps in the INSTALL file.
At step 5, edit config.h by change g95 to gfortrain.
The following lib file is not found by the compiler
/usr/include/X11/extensions/shape.h
I copied the following dir from another machine:
/usr/include/X11/extensions
and put it in my home dir in:
~/usr/include/X11/extensions
I modified the files changing the reported line number:
/nfs/user03/tbalius/amber9/src/leap/src/Xmu/ShapeWidg.c line: 27 /nfs/user03/tbalius/amber9/src/leap/src/Xraw/Logo.c line: 26 /nfs/user03/tbalius/amber9/src/leap/src/Xraw/Mailbox.c line: 64 from: #include <X11/extensions/shape.h> to: #include </nfs/user03/tbalius/usr/include/X11/extensions/shape.h>
instead we should have
/usr/include/X11/extensions/shape.h x11proto-xext-dev
installed
I get the following Error:
/usr/bin/ld: cannot find -lXext
In progress.