Integration.pl
From Rizzo_Lab
Revision as of 15:08, 19 January 2010 by Stonybrook (talk | contribs)
#!/usr/bin/perl -w open FILE, $ARGV[0]; if ($#ARGV>0) { $quiet = $ARGV[1]; } else { $quiet = 0; } $i=0; while ($line=<FILE>) { $line =~ /\s*([0-9]+.[0-9]+)\s+(-?[0-9]+.[0-9]+)\s+(-?[0-9]+.[0-9]+)/; ($lambda[$i],$dvdl[$i],$err[$i])=($1,$2,$3); # uncomment for attractive # if ( $dvdl[$i]<0 ) { $dvdl[$i]=0 ;} # or repulsive part only # if ( $dvdl[$i]>0 ) { $dvdl[$i]=0 ;} $i++; } # interpolate to l=0 if ($lambda[0] != 0) { $ynew = ($lambda[0]*$dvdl[1] - $lambda[1]*$dvdl[0]) / ($lambda[0]-$lambda[1]); unshift @lambda,0; unshift @dvdl,$ynew; unshift @err,$err[0]; # print "Added new value at $lambda[0] of $dvdl[0] +- $err[0]\n"; $i++; } #and to l=1 if ($lambda[$i-1] != 1.0) { $ynew = ( $dvdl[$i-1]*($lambda[$i-2] - 1 ) + $dvdl[$i-2]*(1-$lambda[$i-1]) ) / ($lambda[$i-2]-$lambda[$i-1]); push @lambda,1; push @dvdl,$ynew; push @err, $err[$i-1]; $i++; # print "Added new value at $lambda[$i-1] of $dvdl[$i-1] +- $err[$i-1]\n"; } for ($j=0 ; $j<$i ; $j++) { if ($i == 1) { $width[$j] = 1; } elsif ($j==0) { $width[$j] = 0.5 * ( $lambda[$j] + $lambda[$j+1] ); } elsif ($j == $i-1) { $width[$j] = 1 - 0.5 * ( $lambda[$j] + $lambda[$j-1] ); } else { $width[$j]= 0.5 * ( $lambda[$j+1] - $lambda[$j-1] ); } } $tot_dvdl=0; $tot_err=0; for ($j=0 ; $j<$i ; $j++) { $tot_dvdl+=$width[$j]*$dvdl[$j]; # Simple additive error propagation $tot_err+=$width[$j]*$err[$j]; # Gaussian Error Propagation # $tot_err+=($width[$j]*$err[$j])**2; if ($quiet==0) { printf "l: %4.2f (w=%4.3f)\t cont: %4.4f+-%4.4f", $lambda[$j], $width[$j], $width[$j]*$dvdl[$j], $width[$j]*$err[$j]; # print "l: $lambda[$j] (w=$width[$j])\t cont:",$width[$j]*$dvdl[$j],"+-",$width[$j]*$err[$j]; print "\n"; # printf "%4.4f ", $width[$j]*$dvdl[$j]; } } # For Gaussian error proagation # $tot_err = sqrt($tot_err); if ($quiet==0) { print "Total DV/DL:", $tot_dvdl, "+-",$tot_err,"\n"; } else { # print $tot_dvdl,"\t",$tot_err,"\n"; printf ("%4.2f +- %2.2f\n", $tot_dvdl, $tot_err); }