2015 AMBER tutorial with PARP
From Rizzo_Lab
Revision as of 14:20, 1 April 2015 by Fochtman (talk | contribs) (Created page with " For additional Rizzo Lab tutorials see AMBER Tutorials. In this tutorial, we will learn how to run a molecular dynamics simulation of a protein-ligand complex. We will ...")
For additional Rizzo Lab tutorials see AMBER Tutorials.
In this tutorial, we will learn how to run a molecular dynamics simulation of a protein-ligand complex. We will then post-process that simulation by calculating structural fluctuations (with RMSD) and free energies of binding (MM-GBSA).