User contributions
(Latest | Earliest) View (newer 100) (older 100) (20 | 50 | 100 | 250 | 500).
- 11:28, 27 February 2012 (diff | hist) . . (+48) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:28, 27 February 2012 (diff | hist) . . (+4,489) . . 2012 DOCK tutorial with Streptavidin (→Virtual Screening Preparation)
- 11:28, 27 February 2012 (diff | hist) . . (+5) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:26, 27 February 2012 (diff | hist) . . (+84) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:25, 27 February 2012 (diff | hist) . . (+52) . . N File:2012 DOCK Tutorial 1DF8 surface spheres 10 angstroms.png (2012_DOCK_Tutorial_1DF8_surface_spheres_10 angstroms) (top)
- 11:24, 27 February 2012 (diff | hist) . . (0) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:23, 27 February 2012 (diff | hist) . . (+49) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:22, 27 February 2012 (diff | hist) . . (+148) . . 2012 DOCK tutorial with Streptavidin (→Virtual Screening Preparation)
- 11:22, 27 February 2012 (diff | hist) . . (+4,547) . . 2012 DOCK tutorial with Streptavidin (→Docking and Results)
- 11:22, 27 February 2012 (diff | hist) . . (+1,271) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:19, 27 February 2012 (diff | hist) . . (+22) . . 2012 DOCK tutorial with Streptavidin (→Running DOCK in Serial)
- 11:18, 27 February 2012 (diff | hist) . . (-2) . . 2012 DOCK tutorial with Streptavidin (→Running DOCK in Parallel using MPI)
- 11:15, 27 February 2012 (diff | hist) . . (+2,562) . . 2012 DOCK tutorial with Streptavidin (→VII. Running DOCK in Serial and in Parallel on Seawulf)
- 11:14, 27 February 2012 (diff | hist) . . (0) . . N File:DOCK 5th run result.png (top)
- 11:14, 27 February 2012 (diff | hist) . . (0) . . N File:DOCK 4th run result.png (top)
- 11:14, 27 February 2012 (diff | hist) . . (+34) . . 2012 DOCK tutorial with Streptavidin (→Docking and Results)
- 11:12, 27 February 2012 (diff | hist) . . (-1) . . 2012 DOCK tutorial with Streptavidin (→Preparing the Ligand and Enzyme in Chimera)
- 11:11, 27 February 2012 (diff | hist) . . (+2,071) . . 2012 DOCK tutorial with Streptavidin (→Preparing the Ligand and Enzyme in Chimera)
- 11:11, 27 February 2012 (diff | hist) . . (+7) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 11:10, 27 February 2012 (diff | hist) . . (-33) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 11:10, 27 February 2012 (diff | hist) . . (+321) . . 2012 DOCK tutorial with Streptavidin (→Docking and Results)
- 11:09, 27 February 2012 (diff | hist) . . (+1) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:09, 27 February 2012 (diff | hist) . . (+195) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:07, 27 February 2012 (diff | hist) . . (0) . . N File:DOCK 3rd run result.png (top)
- 11:05, 27 February 2012 (diff | hist) . . (+533) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:04, 27 February 2012 (diff | hist) . . (0) . . File:2012 DOCK Tutorial 1DF8 dms.png (uploaded a new version of "File:2012 DOCK Tutorial 1DF8 dms.png": Reverted to version as of 15:01, 27 February 2012) (top)
- 11:04, 27 February 2012 (diff | hist) . . (0) . . File:2012 DOCK Tutorial 1DF8 dms.png (uploaded a new version of "File:2012 DOCK Tutorial 1DF8 dms.png": 2012_DOCK_Tutorial_1DF8_dms)
- 11:03, 27 February 2012 (diff | hist) . . (+48) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 11:02, 27 February 2012 (diff | hist) . . (-9) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:02, 27 February 2012 (diff | hist) . . (+977) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 11:02, 27 February 2012 (diff | hist) . . (-49) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 11:01, 27 February 2012 (diff | hist) . . (0) . . File:2012 DOCK Tutorial 1DF8 dms.png (uploaded a new version of "File:2012 DOCK Tutorial 1DF8 dms.png": 2012_DOCK_Tutorial_1DF8_dms)
- 11:00, 27 February 2012 (diff | hist) . . (+49) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:59, 27 February 2012 (diff | hist) . . (+287) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:58, 27 February 2012 (diff | hist) . . (+77) . . 2012 DOCK tutorial with Streptavidin (→Spheres)
- 10:58, 27 February 2012 (diff | hist) . . (+33) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:56, 27 February 2012 (diff | hist) . . (+720) . . 2012 DOCK tutorial with Streptavidin (→III. Generating Receptor Surface and Spheres)
- 10:56, 27 February 2012 (diff | hist) . . (0) . . N File:2012 DOCK Tutorial 1DF8 dms.png
- 10:55, 27 February 2012 (diff | hist) . . (-40) . . 2012 DOCK tutorial with Streptavidin (→VI. Virtual Screening)
- 10:55, 27 February 2012 (diff | hist) . . (0) . . N File:VirtualScreeningTest.png (top)
- 10:55, 27 February 2012 (diff | hist) . . (+49) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:54, 27 February 2012 (diff | hist) . . (+40) . . 2012 DOCK tutorial with Streptavidin (→VI. Virtual Screening)
- 10:54, 27 February 2012 (diff | hist) . . (+208) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:52, 27 February 2012 (diff | hist) . . (+12) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:52, 27 February 2012 (diff | hist) . . (+5,391) . . 2012 DOCK tutorial with Streptavidin (→Docking)
- 10:50, 27 February 2012 (diff | hist) . . (+83) . . N File:DOCK 2nd run result.png (By only setting orient_ligand option to "yes", the docking result looks pretty bad.) (top)
- 10:49, 27 February 2012 (diff | hist) . . (+30) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:48, 27 February 2012 (diff | hist) . . (0) . . N File:2012 DOCK Tutorial 1DF8 surface.png (top)
- 10:47, 27 February 2012 (diff | hist) . . (0) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:46, 27 February 2012 (diff | hist) . . (+3) . . 2012 DOCK tutorial with Streptavidin (→Downloading the PDB Structure (1DF8))
- 10:45, 27 February 2012 (diff | hist) . . (+37) . . 2012 DOCK tutorial with Streptavidin (→VI. Virtual Screening)
- 10:44, 27 February 2012 (diff | hist) . . (+11) . . 2012 DOCK tutorial with Streptavidin (→Preparing for DOCK with Chimera)
- 10:42, 27 February 2012 (diff | hist) . . (+48) . . 2012 DOCK tutorial with Streptavidin (→Receptor Surface)
- 10:42, 27 February 2012 (diff | hist) . . (+423) . . 2012 DOCK tutorial with Streptavidin (→Downloading the PDB Structure)
- 10:40, 27 February 2012 (diff | hist) . . (+11) . . 2012 DOCK tutorial with Streptavidin (→IV. Generating Box and Grid)
- 10:38, 27 February 2012 (diff | hist) . . (-21) . . 2012 DOCK tutorial with Streptavidin (→IV. Generating Box and Grid)
- 10:36, 27 February 2012 (diff | hist) . . (+339) . . 2012 DOCK tutorial with Streptavidin (→III. Generating Receptor Surface and Spheres)
- 18:43, 26 February 2012 (diff | hist) . . (+3,014) . . 2012 DOCK tutorial with Streptavidin (→Grid)
- 18:07, 26 February 2012 (diff | hist) . . (+1) . . 2012 DOCK tutorial with Streptavidin (→Box)
- 18:06, 26 February 2012 (diff | hist) . . (+715) . . 2012 DOCK tutorial with Streptavidin (→Box)
- 18:02, 26 February 2012 (diff | hist) . . (+111) . . N File:1DF8 box.png (Chimera rendering of 1DF8 receptor with a ligand and the box generated around the ligand using showbox program.) (top)
- 15:41, 26 February 2012 (diff | hist) . . (+78) . . 2012 DOCK tutorial with Streptavidin (→Box)
- 15:33, 26 February 2012 (diff | hist) . . (+60) . . 2012 DOCK tutorial with Streptavidin (→Box)
- 15:32, 26 February 2012 (diff | hist) . . (+98) . . 2012 DOCK tutorial with Streptavidin (→Box)
- 15:22, 26 February 2012 (diff | hist) . . (-62) . . 2012 DOCK tutorial with Streptavidin (→Box)
- 15:20, 26 February 2012 (diff | hist) . . (+165) . . N File:Flow chart.JPG (Flow Chart of Questions for Showbox (Red path is followed in this tutorial) source:http://dock.compbio.ucsf.edu/DOCK_6/tutorials/grid_generation/generating_grid.html) (top)
- 15:17, 26 February 2012 (diff | hist) . . (+673) . . 2012 DOCK tutorial with Streptavidin (→Box)
- 07:17, 25 February 2012 (diff | hist) . . (0) . . 2012 DOCK tutorial with Streptavidin
- 07:17, 25 February 2012 (diff | hist) . . (-6) . . 2012 DOCK tutorial with Streptavidin
- 14:29, 10 February 2012 (diff | hist) . . (+4) . . 2012 RCR GROUP MEETING
- 07:18, 10 February 2012 (diff | hist) . . (+120) . . Semester Checklist (top)
- 09:25, 3 February 2012 (diff | hist) . . (+1,011) . . Rizzo Lab Research
- 09:09, 3 February 2012 (diff | hist) . . (+29) . . Rizzo Lab Research (→GP41)
- 09:08, 3 February 2012 (diff | hist) . . (+62) . . Rizzo Lab Research (→GP41)
- 09:05, 3 February 2012 (diff | hist) . . (+3) . . Rizzo Lab Research (→HIV/AIDS)
- 09:03, 3 February 2012 (diff | hist) . . (+8) . . Rizzo Lab Research (→GP41)
- 09:03, 3 February 2012 (diff | hist) . . (+154) . . Rizzo Lab Research (→GP41)
- 07:23, 2 February 2012 (diff | hist) . . (+16) . . 2012 RCR GROUP MEETING
- 10:36, 24 January 2012 (diff | hist) . . (-5) . . Semester Checklist
- 10:34, 24 January 2012 (diff | hist) . . (+7) . . Semester Checklist
- 10:26, 24 January 2012 (diff | hist) . . (+369) . . N Semester Checklist (Created page with "Check G status and register for courses. Update direct deposit and health insurance information every time funding sources change. Additional information for foreign students...")
- 08:41, 24 January 2012 (diff | hist) . . (+25) . . Rizzo Lab Information and Tutorials (→Miscellaneous)
- 14:42, 6 January 2012 (diff | hist) . . (+28) . . m 2012 RCR GROUP MEETING
- 11:17, 8 December 2011 (diff | hist) . . (+5) . . Joint Group Meeting 2011 (top)
- 14:53, 6 December 2011 (diff | hist) . . (+3) . . MD Simulation: Protein in Water (Pt. 2)
- 14:52, 6 December 2011 (diff | hist) . . (+1) . . MD Simulation: Protein in Water (Pt. 2)
- 14:52, 6 December 2011 (diff | hist) . . (+49) . . MD Simulation: Protein in Water (Pt. 2)
- 12:31, 6 December 2011 (diff | hist) . . (-20,756) . . MD Simulation: Protein in Water
- 12:30, 6 December 2011 (diff | hist) . . (+20,753) . . N MD Simulation: Protein in Water (Pt. 2)
- 12:29, 6 December 2011 (diff | hist) . . (+50) . . MD Simulation: Protein in Water
- 12:21, 6 December 2011 (diff | hist) . . (+5) . . 2011 RCR GROUP MEETING
- 12:54, 28 October 2011 (diff | hist) . . (-7) . . 2011 AMS-535 Fall (→Course Participants, Topics, References, and Schedule)
- 10:53, 18 October 2011 (diff | hist) . . (+1) . . MD Simulation: Protein in Water
- 10:52, 18 October 2011 (diff | hist) . . (-1) . . MD Simulation: Protein in Water (→NVT Simulation)
- 10:37, 18 October 2011 (diff | hist) . . (+1) . . MD Simulation: Protein in Water
- 10:37, 18 October 2011 (diff | hist) . . (-67) . . MD Simulation: Protein in Water (→Download and Prepare PDB File)
- 12:34, 10 October 2011 (diff | hist) . . (-2) . . 2011 AMS-535 Fall (→Course Participants, Topics, References, and Schedule)
- 15:21, 23 September 2011 (diff | hist) . . (0) . . 2011-2012 AMS-532 Fall-Spring (→Journal Club Schedule (Fall & Spring) and Responsible Conduct of Research Schedule (Spring))
- 15:20, 23 September 2011 (diff | hist) . . (+3) . . 2011-2012 AMS-532 Fall-Spring (→Journal Club Schedule (Fall & Spring) and Responsible Conduct of Research Schedule (Spring))
- 15:20, 23 September 2011 (diff | hist) . . (+116) . . 2011-2012 AMS-532 Fall-Spring (→Journal Club Schedule (Fall & Spring) and Responsible Conduct of Research Schedule (Spring))
(Latest | Earliest) View (newer 100) (older 100) (20 | 50 | 100 | 250 | 500).