Difference between revisions of "Rizzo Lab Members and Contact Information"

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== CONTACT ==
 
== CONTACT ==
{| border="1" cellpadding="8" cellspacing="0" style="background:white; text-align:left; width:90%"
+
{| border="1" cellpadding="8" cellspacing="0" style="background:white; text-align:left; width:100%"
 
|- style="background:white"
 
|- style="background:white"
! style="width:45%" |Robert C. Rizzo
+
! style="width:50%" |Robert C. Rizzo
  
 
Stony Brook University  
 
Stony Brook University  
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Stony Brook, NY 11794-3600
 
Stony Brook, NY 11794-3600
  
! style="width:45%" |Email:  rizzorc [at] gmail [dot] com
+
! style="width:50%" |Email:  rizzorc [at] gmail [dot] com
  
 
Office: (631) 632-9340
 
Office: (631) 632-9340
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[[Image: Rizzo_lab_2019.png|thumb|center|4000px|'''Current 2019 Rizzo Lab Members:''' ''from left to right'' Stephen, Guilherme, Rodger, Rob, Chris, John, Scott, and Lauren]]
 
[[Image: Rizzo_lab_2019.png|thumb|center|4000px|'''Current 2019 Rizzo Lab Members:''' ''from left to right'' Stephen, Guilherme, Rodger, Rob, Chris, John, Scott, and Lauren]]
  
== CURRENT MEMBERS ==
+
==RIZZO LAB ==
{| border="1" cellpadding="8" cellspacing="0" style="background:white; text-align:left; width:90%"
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{| border="1" cellpadding="8" cellspacing="0" style="background:white; text-align:left; width:100%"
 
|- style="background:lightblue"
 
|- style="background:lightblue"
! style="width:20%" !|CURRENT MEMBERS
+
! style="width:30%" !|CURRENT MEMBERS
 
! style="width:20%" !|Status
 
! style="width:20%" !|Status
 
! style="width:20%" !|Project
 
! style="width:20%" !|Project
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|-
 
|-
 
|[https://www.gduarter.com Guilherme Duarte Ramos Matos]
 
|[https://www.gduarter.com Guilherme Duarte Ramos Matos]
 
Guilherme.duarteramosmatos [at] stonybrook [dot] edu
 
 
||Postdoctoral
 
||Postdoctoral
 
||Cheminformatics integration, COVID-19
 
||Cheminformatics integration, COVID-19
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|-
 
|-
 
|- style="background:lightgreen"
 
|- style="background:lightgreen"
! style="width:20%" !|FORMER MEMBERS
+
! style="width:20%" !|FORMER POSTDOCS
 
! style="width:20%" !|Status
 
! style="width:20%" !|Status
 
! style="width:20%" !|Project
 
! style="width:20%" !|Project
 
! style="width:10%" !|Year
 
! style="width:10%" !|Year
 
! style="width:20%" !|Position
 
! style="width:20%" !|Position
|Rodger Tan
 
||Undergraduate
 
||Test Set, benchmarking, de novo design
 
||2019 - 2020
 
|| --
 
 
|-
 
|-
|Scott Laverty
+
|Dwight McGee
||Undergraduate
+
||Postdoctoral
||DOCK6 benchmarking with Autodock4
+
||HIVgp41, Free energy calculations, de novo design
||2019 - 2020
+
||2015 - 2018
||UPenn Chemistry Doctoral Program
+
|| [http://www.silicontx.com/ Silicon Therapeutics]
 +
|-
 +
|William J. Allen
 +
||Postdoctoral
 +
||HIVgp41, DOCK development
 +
||2011 - 2015
 +
||[http://www.tacc.utexas.edu/ TACC]
 
|-
 
|-
|Stephen Telehany
+
| Bentley Strockbine
||Masters
+
||Postdoctoral 
||Zika Virus
+
||HIVgp41
||2017 - 2020
+
||2005 - 2007
 
|| --
 
|| --
 +
|-
 +
|- style="background:Violet"
 +
! style="width:20%" !|FORMER PHD STUDENTS
 +
! style="width:20%" !|Status
 +
! style="width:20%" !|Project
 +
! style="width:10%" !|Year
 +
! style="width:20%" !|Position
 
|-
 
|-
 
|Yuchen Zhou
 
|Yuchen Zhou
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||Solvated footprints, Small-molecule inhibitor for HER2
 
||Solvated footprints, Small-molecule inhibitor for HER2
 
||2013 - 2018
 
||2013 - 2018
|| Postdoc, [http://www.choderalab.org/ Chodera Lab] at [https://www.mskcc.org/ MSKCC]
+
|| Postdoctoral, [http://www.choderalab.org/ Chodera Lab] at [https://www.mskcc.org/ MSKCC]
 
|-
 
|-
 
|Courtney Singleton
 
|Courtney Singleton
||MD/PhD
+
||MD / PhD
 
||HIVgp41, De novo design, genetic algorithm
 
||HIVgp41, De novo design, genetic algorithm
 
||2014 - 2018
 
||2014 - 2018
 
||Stony Brook Medical School
 
||Stony Brook Medical School
|-
 
|Dwight McGee
 
||Postdoc
 
||HIVgp41, Free energy calculations, de novo design
 
||2015 - 2018
 
|| [http://www.silicontx.com/ Silicon Therapeutics]
 
 
|-
 
|-
 
|Brian Fochtman
 
|Brian Fochtman
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||2010 - 2015
 
||2010 - 2015
 
||Novo Nordisk
 
||Novo Nordisk
|-
 
|Brian Ralph
 
||Undergraduate
 
||Fatty acid binding protein, De novo design
 
||2013 - 2015
 
||Dental school
 
|-
 
|William J. Allen
 
||Postdoc
 
||HIVgp41, DOCK development
 
||2011 - 2015
 
||[http://www.tacc.utexas.edu/ TACC]
 
 
|-
 
|-
 
|Yulin Huang
 
|Yulin Huang
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||2007 - 2012
 
||2007 - 2012
 
||Project Lead, RAS Computational Chemistry Team in the Cancer Research Tecnhology Program (CRTP) at the [https://frederick.cancer.gov/ Frederick National Lab for Cancer Research]
 
||Project Lead, RAS Computational Chemistry Team in the Cancer Research Tecnhology Program (CRTP) at the [https://frederick.cancer.gov/ Frederick National Lab for Cancer Research]
 +
|-
 +
| Noel Carrascal
 +
||PhD (co-advisor)
 +
||DOCK method development
 +
||2005 - 2007
 +
|| --
 +
|-
 +
|- style="background:Yellow"
 +
! style="width:20%" !|FORMER MASTERS STUDENTS
 +
! style="width:20%" !|Status
 +
! style="width:20%" !|Project
 +
! style="width:10%" !|Year
 +
! style="width:20%" !|Position
 +
|-
 +
|Stephen Telehany
 +
||Masters
 +
||Zika Virus
 +
||2017 - 2020
 +
|| --
 
|-
 
|-
 
|Patrick Holden
 
|Patrick Holden
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||2009 - 2011
 
||2009 - 2011
 
|| --
 
|| --
 +
|-
 +
| Rashi Goyal
 +
||Masters
 +
||Influenza, HIV
 +
||2007 - 2010
 +
|| --
 +
|-
 +
| Brian McGillick
 +
||Masters
 +
||HIVgp41
 +
||2007 - 2010
 +
|| --
 +
|-
 +
|- style="background:lightSalmon"
 +
! style="width:20%" !|FORMER UNDERGRADUATE STUDENTS
 +
! style="width:20%" !|Status
 +
! style="width:20%" !|Project
 +
! style="width:10%" !|Year
 +
! style="width:20%" !|Position
 +
|-
 +
|Rodger Tan
 +
||Undergraduate
 +
||Test Set, benchmarking, de novo design
 +
||2019 - 2020
 +
|| --
 +
|-
 +
|Scott Laverty
 +
||Undergraduate
 +
||DOCK6 benchmarking with Autodock4
 +
||2019 - 2020
 +
||UPenn Chemistry Doctoral Program
 +
|-
 +
|Brian Ralph
 +
||Undergraduate
 +
||Fatty acid binding protein, De novo design
 +
||2013 - 2015
 +
||Dental school
 
|-
 
|-
 
| Jibril Ashiru-Balogun
 
| Jibril Ashiru-Balogun
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||Influenza  
 
||Influenza  
 
||2009 - 2010
 
||2009 - 2010
|| --
 
|-
 
| Rashi Goyal
 
||Masters
 
||Influenza, HIV
 
||2007 - 2010
 
|| --
 
|-
 
| Brian McGillick
 
||Masters
 
||HIVgp41
 
||2007 - 2010
 
 
|| --
 
|| --
 
|-
 
|-
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||HIVgp41
 
||HIVgp41
 
||2008
 
||2008
|| --
 
|-
 
| Bentley Strockbine
 
||Postdoc 
 
||HIVgp41
 
||2005 - 2007
 
|| --
 
|-
 
| Noel Carrascal
 
||PhD (co-advisor)
 
||DOCK method development
 
||2005 - 2007
 
 
|| --
 
|| --
 
|-
 
|-
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||Testset development
 
||Testset development
 
||2005 - 2007
 
||2005 - 2007
 +
|| --
 +
|-
 +
|- style="background:Hotpink"
 +
! style="width:20%" !|FORMER HIGH SCHOOL STUDENTS
 +
! style="width:20%" !|Status
 +
! style="width:20%" !|Project
 +
! style="width:10%" !|Year
 +
! style="width:20%" !|Position
 +
|-
 +
| Araya Glenn
 +
||High School Student
 +
||Alzheimer’s disease
 +
||2019 - 2020
 
|| --
 
|| --
 
|-
 
|-
 
|}
 
|}

Latest revision as of 16:58, 5 November 2020

CONTACT

Robert C. Rizzo

Stony Brook University

Department of Applied Mathematics and Statistics

Office: Math Tower 1-111

Lab: Math Tower 3-129

Stony Brook, NY 11794-3600

Email: rizzorc [at] gmail [dot] com

Office: (631) 632-9340

Lab: (631) 632-8519

Fax: (631) 632-8490

Website: rizzolab.org

Wiki: ringo.ams.sunysb.edu


Current 2019 Rizzo Lab Members: from left to right Stephen, Guilherme, Rodger, Rob, Chris, John, Scott, and Lauren

RIZZO LAB

CURRENT MEMBERS Status Project Year Email
Dr. Robert C. Rizzo Principle Investigator Group leader 2004 - present rizzorc [at] gmail [dot] com
Guilherme Duarte Ramos Matos Postdoctoral Cheminformatics integration, COVID-19 2019 - present Guilherme.duarteramosmatos [at] stonybrook [dot] edu
Lauren Prentis Graduate Student Tsg101, de novo design, covalent docking, genetic algorithm 2016 - present lauren.prentis [at] stonybrook [dot] edu
John Bickel Graduate Student de novo design, COVID-19 2019 - present john.bickel [at] stonybrook [dot] edu
Christopher Corbo Graduate Student Test Set benchmarking, COVID-19 2019 - present christopher.corbo [at] stonybrook [dot] edu
Steven Pak Graduate Student de novo design, FGFR2, Cheminformatics 2020 - present steven.pak [at] stonybrook [dot] edu
FORMER POSTDOCS Status Project Year Position
Dwight McGee Postdoctoral HIVgp41, Free energy calculations, de novo design 2015 - 2018 Silicon Therapeutics
William J. Allen Postdoctoral HIVgp41, DOCK development 2011 - 2015 TACC
Bentley Strockbine Postdoctoral HIVgp41 2005 - 2007 --
FORMER PHD STUDENTS Status Project Year Position
Yuchen Zhou PhD / Masters BoNT/E, DOCK scoring functions, FABP5 2012 - 2018 Postdoc, Filizola Lab at ISMMS
Jiaye Guo PhD Solvated footprints, Small-molecule inhibitor for HER2 2013 - 2018 Postdoctoral, Chodera Lab at MSKCC
Courtney Singleton MD / PhD HIVgp41, De novo design, genetic algorithm 2014 - 2018 Stony Brook Medical School
Brian Fochtman PhD HIVgp41, DOCK development 2011 - 2017 The FDA
Lingling Jiang PhD HIVgp41, Pharmacophore modeling 2010 - 2015 Novo Nordisk
Yulin Huang PhD EGFR, IGF-IR 2008 - 2013 Wall Street
Sudipto Mukherjee PhD / Masters DOCK development, HIVgp41 2005 - 2012 Postdoc, Voelz Lab
Trent E. Balius PhD EGFR, HIVgp41, DOCK development 2007 - 2012 Project Lead, RAS Computational Chemistry Team in the Cancer Research Tecnhology Program (CRTP) at the Frederick National Lab for Cancer Research
Noel Carrascal PhD (co-advisor) DOCK method development 2005 - 2007 --
FORMER MASTERS STUDENTS Status Project Year Position
Stephen Telehany Masters Zika Virus 2017 - 2020 --
Patrick Holden Masters HIVgp41 2009 - 2011 --
Rashi Goyal Masters Influenza, HIV 2007 - 2010 --
Brian McGillick Masters HIVgp41 2007 - 2010 --
FORMER UNDERGRADUATE STUDENTS Status Project Year Position
Rodger Tan Undergraduate Test Set, benchmarking, de novo design 2019 - 2020 --
Scott Laverty Undergraduate DOCK6 benchmarking with Autodock4 2019 - 2020 UPenn Chemistry Doctoral Program
Brian Ralph Undergraduate Fatty acid binding protein, De novo design 2013 - 2015 Dental school
Jibril Ashiru-Balogun Undergraduate HIVgp41 2010 - 2011 --
Brian Shea Undergraduate Kinases 2010 --
Patrick Murphy Undergraduate Influenza 2009 - 2010 --
Kenneth Ascher Undergraduate DOCK method development 2009 - 2010 --
Dimir Abrar Undergraduate HIVRT crossdocking 2008 - 2009 --
Chetan Raj Rupakheti Summer HIVgp41 2008 --
Ricky Chachra Undergraduate Influenza drug resistance 2005 - 2007 --
Amee Patel Undergraduate Testset development 2005 - 2007 --
FORMER HIGH SCHOOL STUDENTS Status Project Year Position
Araya Glenn High School Student Alzheimer’s disease 2019 - 2020 --