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  1. (hist) ‎2008 Spring ‎[0 bytes]
  2. (hist) ‎De Novo Design ‎[0 bytes]
  3. (hist) ‎2019 Covalent docking tutorial 1 with PDB 2VKG ‎[0 bytes]
  4. (hist) ‎Outdated Info ‎[13 bytes]
  5. (hist) ‎2020 DOCK tutorial 1 with PDBID XXXX ‎[16 bytes]
  6. (hist) ‎DOCK VS Parameters ‎[21 bytes]
  7. (hist) ‎Seawulf Programs Needed ‎[22 bytes]
  8. (hist) ‎DOCK VS Utilities ‎[31 bytes]
  9. (hist) ‎DOCK VS Utilities/Info ‎[31 bytes]
  10. (hist) ‎AMBER tricks ‎[35 bytes]
  11. (hist) ‎Coming Soon ‎[36 bytes]
  12. (hist) ‎DOCK GA Tutorials ‎[38 bytes]
  13. (hist) ‎INSPH ‎[47 bytes]
  14. (hist) ‎Showsph.in ‎[49 bytes]
  15. (hist) ‎DOCK CV Tutorials ‎[51 bytes]
  16. (hist) ‎Lab-designed code and programs ‎[55 bytes]
  17. (hist) ‎De Novo Design (DOCK DN) ‎[62 bytes]
  18. (hist) ‎Gnuplot ‎[84 bytes]
  19. (hist) ‎2020 AMS-536 Spring ‎[90 bytes]
  20. (hist) ‎Making images for publication ‎[91 bytes]
  21. (hist) ‎Showbox.in ‎[99 bytes]
  22. (hist) ‎DOCK DN Utilities ‎[99 bytes]
  23. (hist) ‎DOCK DN Utilities/Info ‎[99 bytes]
  24. (hist) ‎Ghostscript ‎[103 bytes]
  25. (hist) ‎Small Molecule Evolution (DOCK GA) ‎[104 bytes]
  26. (hist) ‎DOCK GA Input File(s) ‎[104 bytes]
  27. (hist) ‎Config ‎[114 bytes]
  28. (hist) ‎CONGA ‎[115 bytes]
  29. (hist) ‎CONGA (CONstruction by Genetic Algorithm) ‎[115 bytes]
  30. (hist) ‎General Dock Utilities ‎[132 bytes]
  31. (hist) ‎General Dock Utilities/Info ‎[132 bytes]
  32. (hist) ‎Visiting BNL ‎[140 bytes]
  33. (hist) ‎Amber to pdb ‎[148 bytes]
  34. (hist) ‎Rename files in Unix ‎[169 bytes]
  35. (hist) ‎Make surface ‎[173 bytes]
  36. (hist) ‎Get Job ids to use for llcancel ‎[181 bytes]
  37. (hist) ‎Legacy Info ‎[188 bytes]
  38. (hist) ‎Gdb (GNU Debugger) ‎[201 bytes]
  39. (hist) ‎Archiving old data ‎[203 bytes]
  40. (hist) ‎Get time for job completion ‎[206 bytes]
  41. (hist) ‎Common Errors - ctrl M ‎[207 bytes]
  42. (hist) ‎Pdb to mol2 ‎[209 bytes]
  43. (hist) ‎Getting a BNL Account ‎[210 bytes]
  44. (hist) ‎Benchmarking ‎[221 bytes]
  45. (hist) ‎AMBER Lipid Tutorials ‎[232 bytes]
  46. (hist) ‎Which Unix Distribution? ‎[233 bytes]
  47. (hist) ‎Method development ‎[237 bytes]
  48. (hist) ‎Ethernet Cables ‎[244 bytes]
  49. (hist) ‎Valgrind ‎[252 bytes]
  50. (hist) ‎Reference.vmd.script ‎[270 bytes]
  51. (hist) ‎Wiki Editing ‎[271 bytes]
  52. (hist) ‎Example Input Files ‎[273 bytes]
  53. (hist) ‎DOCK Denovo ‎[285 bytes]
  54. (hist) ‎De novo DOCK ‎[285 bytes]
  55. (hist) ‎DOCK NOVA ‎[285 bytes]
  56. (hist) ‎NOVA ‎[285 bytes]
  57. (hist) ‎Influenza ‎[290 bytes]
  58. (hist) ‎X-Win32 ‎[297 bytes]
  59. (hist) ‎Unix find ‎[316 bytes]
  60. (hist) ‎Sphere Generation ‎[320 bytes]
  61. (hist) ‎Secure Shell (ssh) ‎[323 bytes]
  62. (hist) ‎Parameter List/Explanations ‎[327 bytes]
  63. (hist) ‎Submitting BlueGene Jobs ‎[336 bytes]
  64. (hist) ‎Drug-like organic molecules ‎[341 bytes]
  65. (hist) ‎Octave ‎[350 bytes]
  66. (hist) ‎Example scripts ‎[356 bytes]
  67. (hist) ‎Advanced Dock Utilities ‎[362 bytes]
  68. (hist) ‎Ways to remove the first line ‎[364 bytes]
  69. (hist) ‎BlueGene ‎[368 bytes]
  70. (hist) ‎Clustering in R ‎[378 bytes]
  71. (hist) ‎Using convert command unix ‎[379 bytes]
  72. (hist) ‎SB2011 testset ‎[379 bytes]
  73. (hist) ‎Advanced Dock Utilities/Information ‎[387 bytes]
  74. (hist) ‎Restraint.vmd.script ‎[390 bytes]
  75. (hist) ‎Histograms in R ‎[397 bytes]
  76. (hist) ‎Compiling Applications for BG/L ‎[402 bytes]
  77. (hist) ‎NOVA (Navigation and Optimization for Virtual Assembly) ‎[413 bytes]
  78. (hist) ‎De Novo Design (previously NOVA) ‎[413 bytes]
  79. (hist) ‎Blocked Standard Error of the Mean ‎[415 bytes]
  80. (hist) ‎Developer's Info ‎[427 bytes]
  81. (hist) ‎NAMD to mol2 ‎[437 bytes]
  82. (hist) ‎R - Statistical Computing ‎[444 bytes]
  83. (hist) ‎Get time estimate for free blocks ‎[445 bytes]
  84. (hist) ‎Release ‎[480 bytes]
  85. (hist) ‎General Dock Development Goals ‎[480 bytes]
  86. (hist) ‎Semester Checklist ‎[491 bytes]
  87. (hist) ‎Journal Articles from UCSF ‎[534 bytes]
  88. (hist) ‎DOCK Abbreviations Guide ‎[548 bytes]
  89. (hist) ‎SDF to mol2 ‎[555 bytes]
  90. (hist) ‎DOCK DN Tutorials ‎[565 bytes]
  91. (hist) ‎Amber to mol2 (protein) ‎[579 bytes]
  92. (hist) ‎Main Page ‎[588 bytes]
  93. (hist) ‎2016 AMBER tutorial with Thrombin ‎[614 bytes]
  94. (hist) ‎Joint Group Meeting 2011 ‎[631 bytes]
  95. (hist) ‎Footprint Plot Visualization ‎[648 bytes]
  96. (hist) ‎ZINC Database ‎[653 bytes]
  97. (hist) ‎ZINC12 Database ‎[653 bytes]
  98. (hist) ‎DOCK Release Objectives ‎[661 bytes]
  99. (hist) ‎Vmd.rmsd.csh ‎[676 bytes]
  100. (hist) ‎Grid.in ‎[692 bytes]
  101. (hist) ‎VMD ‎[695 bytes]
  102. (hist) ‎HIV/AIDS ‎[702 bytes]
  103. (hist) ‎AMBER Tutorials ‎[716 bytes]
  104. (hist) ‎Tutorials ‎[753 bytes]
  105. (hist) ‎Installing MSMS for VMD ‎[771 bytes]
  106. (hist) ‎Making images for publication using vmd ‎[786 bytes]
  107. (hist) ‎Cancer ‎[801 bytes]
  108. (hist) ‎NAMD tutorial ‎[833 bytes]
  109. (hist) ‎Disulfide.txt ‎[842 bytes]
  110. (hist) ‎Sed - Stream Editor in Unix ‎[852 bytes]
  111. (hist) ‎Remove waters from trajectories ‎[867 bytes]
  112. (hist) ‎DOCK GIST Parameters ‎[888 bytes]
  113. (hist) ‎2008-2009 LAB ‎[890 bytes]
  114. (hist) ‎2008 RCR GROUP MEETING ‎[890 bytes]
  115. (hist) ‎Optimize Polar Hydrogens ‎[902 bytes]
  116. (hist) ‎2010 GRD-500 Spring ‎[902 bytes]
  117. (hist) ‎Joint Group Meeting 2010 ‎[903 bytes]
  118. (hist) ‎DOCK VS Tutorials ‎[921 bytes]
  119. (hist) ‎2009-2010 GRD-500 Fall-Spring ‎[934 bytes]
  120. (hist) ‎Joint Group Meeting 2012 ‎[952 bytes]
  121. (hist) ‎2020 DOCK tutorial 4 with PDBID XXXX ‎[956 bytes]
  122. (hist) ‎Research Foundation ‎[973 bytes]
  123. (hist) ‎Setting up insurance through Research Foundation ‎[973 bytes]
  124. (hist) ‎Joint Group Meeting 2013 ‎[980 bytes]
  125. (hist) ‎DOCK CV Development Goals ‎[1,008 bytes]
  126. (hist) ‎Rizzo Lab Downloads ‎[1,010 bytes]
  127. (hist) ‎Ptraj ‎[1,041 bytes]
  128. (hist) ‎Binding Footprint Program ‎[1,080 bytes]
  129. (hist) ‎DOCK GA Developer Progress ‎[1,083 bytes]
  130. (hist) ‎Energy Scoring Method in Grid ‎[1,088 bytes]
  131. (hist) ‎ZINC15 Database ‎[1,092 bytes]
  132. (hist) ‎DOCK CV Benchmarking ‎[1,161 bytes]
  133. (hist) ‎Seawulf Cluster Assessment ‎[1,187 bytes]
  134. (hist) ‎PDFCreator ‎[1,195 bytes]
  135. (hist) ‎DOCK Tutorials ‎[1,294 bytes]
  136. (hist) ‎Pylab ‎[1,300 bytes]
  137. (hist) ‎2010 LAB ‎[1,307 bytes]
  138. (hist) ‎2010 RCR GROUP MEETING ‎[1,307 bytes]
  139. (hist) ‎No t4 step2 min.bash ‎[1,371 bytes]
  140. (hist) ‎With t4 step2 min.bash ‎[1,373 bytes]
  141. (hist) ‎Rotation students Wiki ‎[1,400 bytes]
  142. (hist) ‎LoadLeveler Chain Jobs ‎[1,408 bytes]
  143. (hist) ‎DOCK Compilation ‎[1,437 bytes]
  144. (hist) ‎2018 RCR GROUP MEETING ‎[1,442 bytes]
  145. (hist) ‎MOE ‎[1,469 bytes]
  146. (hist) ‎C Shell Scripting ‎[1,502 bytes]
  147. (hist) ‎Fourier fit ‎[1,555 bytes]
  148. (hist) ‎CVS Commands ‎[1,677 bytes]
  149. (hist) ‎Dell 5110cn Printer ‎[1,700 bytes]
  150. (hist) ‎Sampling Methods ‎[1,814 bytes]
  151. (hist) ‎Ps.m2p ‎[1,823 bytes]
  152. (hist) ‎Rizzo Lab Weekly Group Meetings ‎[1,873 bytes]
  153. (hist) ‎Sequence alignment ‎[1,873 bytes]
  154. (hist) ‎2009 RCR GROUP MEETING ‎[1,878 bytes]
  155. (hist) ‎Announcements: Fall 2013 ‎[1,976 bytes]
  156. (hist) ‎Rsync ‎[1,987 bytes]
  157. (hist) ‎DGHYD ‎[2,002 bytes]
  158. (hist) ‎Unix ‎[2,049 bytes]
  159. (hist) ‎Integration.pl ‎[2,056 bytes]
  160. (hist) ‎AMS-532: Lab Rotations/Journal Club Guidelines ‎[2,065 bytes]
  161. (hist) ‎TIMD integration prep.py ‎[2,100 bytes]
  162. (hist) ‎AMS-532 Guidlines ‎[2,117 bytes]
  163. (hist) ‎Cluster compilations ‎[2,141 bytes]
  164. (hist) ‎Ubq min.mdp ‎[2,155 bytes]
  165. (hist) ‎Stupid awk tricks ‎[2,188 bytes]
  166. (hist) ‎Slick awk tricks ‎[2,188 bytes]
  167. (hist) ‎Families in the Protein Databank ‎[2,247 bytes]
  168. (hist) ‎Make Unique script usage ‎[2,255 bytes]
  169. (hist) ‎DOCK GA Development Goals ‎[2,278 bytes]
  170. (hist) ‎MPICH ‎[2,313 bytes]
  171. (hist) ‎Server Administration ‎[2,329 bytes]
  172. (hist) ‎Apply for NYBlue ‎[2,331 bytes]
  173. (hist) ‎MATLAB ‎[2,365 bytes]
  174. (hist) ‎Stony Brook Joint Group Meetings in Computational Structural Biology ‎[2,397 bytes]
  175. (hist) ‎Seawulf Items Needed ‎[2,402 bytes]
  176. (hist) ‎NAMD Amber inputs ‎[2,405 bytes]
  177. (hist) ‎Vi ‎[2,466 bytes]
  178. (hist) ‎Setting up RSA SecureID token ‎[2,470 bytes]
  179. (hist) ‎No t4 step2 equiprod.bash ‎[2,493 bytes]
  180. (hist) ‎With t4 step2 equiprod.bash ‎[2,499 bytes]
  181. (hist) ‎Joint Group Meeting 2007-2009 ‎[2,541 bytes]
  182. (hist) ‎Formating your Thesis ‎[2,557 bytes]
  183. (hist) ‎Formatting your Thesis ‎[2,557 bytes]
  184. (hist) ‎Run.java.csh ‎[2,566 bytes]
  185. (hist) ‎Installing DOCK ‎[2,577 bytes]
  186. (hist) ‎DOCK Installation ‎[2,577 bytes]
  187. (hist) ‎Rizzo Lab Information and Tutorials ‎[2,614 bytes]
  188. (hist) ‎2017 RCR GROUP MEETING ‎[2,639 bytes]
  189. (hist) ‎Fragment Library Generation ‎[2,653 bytes]
  190. (hist) ‎DOCK VS Development Goals ‎[2,660 bytes]
  191. (hist) ‎TIMD integration.py ‎[2,731 bytes]
  192. (hist) ‎Scp files from cluster to NYBlue ‎[2,791 bytes]
  193. (hist) ‎Setup ssh tunnel to NYBlue fen ‎[2,802 bytes]
  194. (hist) ‎Parameter List ‎[3,030 bytes]
  195. (hist) ‎DOCK DN Parameters ‎[3,030 bytes]
  196. (hist) ‎No t4 step1 inputgen.bash ‎[3,120 bytes]
  197. (hist) ‎No t4 step3 inputgen.bash ‎[3,126 bytes]
  198. (hist) ‎With t4 step1 inputgen.bash ‎[3,130 bytes]
  199. (hist) ‎With t4 step3 inputgen.bash ‎[3,132 bytes]
  200. (hist) ‎Chimera ‎[3,255 bytes]
  201. (hist) ‎2019 RCR GROUP MEETING ‎[3,400 bytes]
  202. (hist) ‎De novo Benchmarking ‎[3,441 bytes]
  203. (hist) ‎DOCK DN Benchmarking ‎[3,441 bytes]
  204. (hist) ‎04md.in ‎[3,478 bytes]
  205. (hist) ‎Rigid.in ‎[3,481 bytes]
  206. (hist) ‎Apply for cluster ‎[3,485 bytes]
  207. (hist) ‎Other Meetings ‎[3,489 bytes]
  208. (hist) ‎3D Analog Library Generation Using Pubchem and Zinc ‎[3,493 bytes]
  209. (hist) ‎Analog Library - Pubchem & Zinc ‎[3,493 bytes]
  210. (hist) ‎DOCK6 POSE Reproduction ‎[3,545 bytes]
  211. (hist) ‎01mi.in ‎[3,552 bytes]
  212. (hist) ‎PBS Queue ‎[3,567 bytes]
  213. (hist) ‎Compiling GROMACS on Cluster ‎[3,789 bytes]
  214. (hist) ‎TIMD extraction.py ‎[3,888 bytes]
  215. (hist) ‎Ubq nvt.mdp ‎[3,999 bytes]
  216. (hist) ‎Automated Families generation from the Protein Databank ‎[4,021 bytes]
  217. (hist) ‎Automated Family generation from PDB ‎[4,021 bytes]
  218. (hist) ‎Ubq md.mdp ‎[4,141 bytes]
  219. (hist) ‎Ubq npt.mdp ‎[4,249 bytes]
  220. (hist) ‎SLURM ‎[4,319 bytes]
  221. (hist) ‎Flex.in ‎[4,327 bytes]
  222. (hist) ‎2012-2013 AMS-532 Fall-Spring ‎[4,340 bytes]
  223. (hist) ‎RGD ‎[4,424 bytes]
  224. (hist) ‎Restraint04.pdb ‎[4,558 bytes]
  225. (hist) ‎Restraint01.pdb ‎[4,561 bytes]
  226. (hist) ‎GRD-500 Integrity in Science ‎[4,589 bytes]
  227. (hist) ‎CONGA Parameter List ‎[4,724 bytes]
  228. (hist) ‎DOCK GA Parameter List ‎[4,724 bytes]
  229. (hist) ‎2009-2010 AMS-532 Fall-Spring ‎[4,860 bytes]
  230. (hist) ‎DOCK CV Input File(s) ‎[4,925 bytes]
  231. (hist) ‎2018 ‎[5,026 bytes]
  232. (hist) ‎DOCK GA Parameters ‎[5,055 bytes]
  233. (hist) ‎2008-2009 AMS-532 Fall-Spring ‎[5,101 bytes]
  234. (hist) ‎2008 AMS-536 Spring ‎[5,225 bytes]
  235. (hist) ‎2017a DOCK tutorial ‎[5,303 bytes]
  236. (hist) ‎Rizzo Lab Members and Contact Information ‎[5,317 bytes]
  237. (hist) ‎2006-2007 AMS-532 Fall-Spring ‎[5,318 bytes]
  238. (hist) ‎Activating your Seawulf Account ‎[5,425 bytes]
  239. (hist) ‎2017 Dock tutorial ‎[5,467 bytes]
  240. (hist) ‎2007-2008 AMS-532 Fall-Spring ‎[5,561 bytes]
  241. (hist) ‎Xmgrace ‎[5,581 bytes]
  242. (hist) ‎2009 AMS-536 Spring ‎[5,638 bytes]
  243. (hist) ‎2011 RCR GROUP MEETING ‎[5,659 bytes]
  244. (hist) ‎BOSS Pure Liquid Simulation Notes ‎[5,740 bytes]
  245. (hist) ‎2020 DOCK tutorial 2 with PDBID XXXX ‎[5,758 bytes]
  246. (hist) ‎Analysis Tools Repository ‎[5,762 bytes]
  247. (hist) ‎2013 AMS-536 Spring ‎[5,803 bytes]
  248. (hist) ‎2016 RCR GROUP MEETING ‎[5,862 bytes]
  249. (hist) ‎2010-2011 GRD-500 Fall-Spring ‎[5,872 bytes]
  250. (hist) ‎2011 GRD-500 Spring ‎[5,872 bytes]
  251. (hist) ‎2011 AMS-536 Spring ‎[5,905 bytes]
  252. (hist) ‎AMS-535 Introduction to Computational Structural Biology and Drug Design ‎[5,970 bytes]
  253. (hist) ‎2010 AMS-536 Spring ‎[5,986 bytes]
  254. (hist) ‎2012 RCR GROUP MEETING ‎[6,357 bytes]
  255. (hist) ‎2014 RCR GROUP MEETING ‎[6,358 bytes]
  256. (hist) ‎2014 AMS-536 Spring ‎[6,427 bytes]
  257. (hist) ‎DOCK Benchmarking ‎[6,458 bytes]
  258. (hist) ‎2015 RCR GROUP MEETING ‎[6,566 bytes]
  259. (hist) ‎2017 AMS-536 Spring ‎[6,673 bytes]
  260. (hist) ‎2013 RCR GROUP MEETING ‎[6,681 bytes]
  261. (hist) ‎DOCK VS Benchmarking ‎[6,701 bytes]
  262. (hist) ‎2016 AMS-536 Spring ‎[6,738 bytes]
  263. (hist) ‎De novo Developer Progress ‎[6,743 bytes]
  264. (hist) ‎Testset Protocols ‎[6,770 bytes]
  265. (hist) ‎AMS-536 Molecular Modeling of Biological Molecules ‎[6,772 bytes]
  266. (hist) ‎2018 AMS-536 Spring ‎[6,801 bytes]
  267. (hist) ‎Per-residue energy decompositions ‎[6,852 bytes]
  268. (hist) ‎BASH scripting ‎[7,042 bytes]
  269. (hist) ‎2015 AMS-536 Spring ‎[7,084 bytes]
  270. (hist) ‎Example of an Ensemble Evolution Input file ‎[7,177 bytes]
  271. (hist) ‎Example of an Single Molecule Evolution Input file ‎[7,181 bytes]
  272. (hist) ‎Example of an CONGA Input file ‎[7,182 bytes]
  273. (hist) ‎AMS-532 Journal Club in Computational Biology ‎[7,270 bytes]
  274. (hist) ‎AMS-532 Laboratory Rotations and Journal Club in Computational Biology ‎[7,291 bytes]
  275. (hist) ‎DOCK DN Development Goals ‎[7,382 bytes]
  276. (hist) ‎Amber on Seawulf (compilation) ‎[7,413 bytes]
  277. (hist) ‎2012 AMS-536 Spring ‎[7,543 bytes]
  278. (hist) ‎2019 AMS-536 Spring ‎[7,580 bytes]
  279. (hist) ‎2011-2012 GRD-500 Fall-Spring ‎[8,050 bytes]
  280. (hist) ‎2012 GRD-500 Spring ‎[8,050 bytes]
  281. (hist) ‎SB2012 ‎[8,083 bytes]
  282. (hist) ‎Rizzo Lab Research ‎[8,208 bytes]
  283. (hist) ‎Example of an Input file ‎[8,420 bytes]
  284. (hist) ‎DOCK DN Input File(s) ‎[8,420 bytes]
  285. (hist) ‎Past Announcements ‎[8,552 bytes]
  286. (hist) ‎2017 Denovo refinement tutorial with PDB 1BJU ‎[9,678 bytes]
  287. (hist) ‎2017 Denovo refine tutorial with PDB 1BJU ‎[9,942 bytes]
  288. (hist) ‎2010-2011 AMS-532 Fall-Spring ‎[9,966 bytes]
  289. (hist) ‎DOCK Denovo Refinement ‎[10,250 bytes]
  290. (hist) ‎Genion.mdp ‎[10,324 bytes]
  291. (hist) ‎SB2010 ‎[10,480 bytes]
  292. (hist) ‎2011-2012 AMS-532 Fall-Spring ‎[10,608 bytes]
  293. (hist) ‎2019 DOCK GA tutorial 1 with 2NNQ ‎[11,328 bytes]
  294. (hist) ‎AMS-531 Laboratory Rotations in Computational Biology ‎[11,502 bytes]
  295. (hist) ‎NAMD on Seawulf ‎[11,737 bytes]
  296. (hist) ‎2013-2014 AMS-532 Fall-Spring ‎[12,134 bytes]
  297. (hist) ‎2019-2020 AMS-532 Fall-Spring ‎[12,253 bytes]
  298. (hist) ‎AMBER TI Tutorials ‎[12,267 bytes]
  299. (hist) ‎2018-2019 AMS-532 Fall-Spring ‎[12,342 bytes]
  300. (hist) ‎2016-2017 AMS-532 Fall-Spring ‎[12,415 bytes]
  301. (hist) ‎2014-2015 AMS-532 Fall-Spring ‎[12,433 bytes]
  302. (hist) ‎2008 DOCK tutorial with 1LAH ‎[12,435 bytes]
  303. (hist) ‎2017-2018 AMS-532 Fall-Spring ‎[12,719 bytes]
  304. (hist) ‎2020 AMS-536 Spring (original syllabus) ‎[13,326 bytes]
  305. (hist) ‎Nonstandard residues prep ‎[13,437 bytes]
  306. (hist) ‎2015-2016 AMS-532 Fall-Spring ‎[13,519 bytes]
  307. (hist) ‎2008 DOCK tutorial with Gleevec ‎[13,826 bytes]
  308. (hist) ‎2019 Covalent docking tutorial 1 with PDB 5VKG ‎[14,495 bytes]
  309. (hist) ‎2020 Denovo tutorial 1 with PDBID 3VJK ‎[14,772 bytes]
  310. (hist) ‎Virtual Screening Protocol ‎[15,092 bytes]
  311. (hist) ‎Rizzo Lab Publications ‎[15,561 bytes]
  312. (hist) ‎2008 AMBER tutorial ‎[15,983 bytes]
  313. (hist) ‎2020 AMBER tutorial with PDBID 3VJK ‎[16,133 bytes]
  314. (hist) ‎2020 Denovo tutorial 3 with PDBID 4F4P ‎[17,453 bytes]
  315. (hist) ‎Virtual Screening Protocol on BlueGene (IGF-IR system) ‎[17,680 bytes]
  316. (hist) ‎Scoring Functions ‎[19,030 bytes]
  317. (hist) ‎2011 DOCK tutorial with Streptavidin ‎[20,494 bytes]
  318. (hist) ‎Joe and Brian de novo stuff ‎[20,526 bytes]
  319. (hist) ‎MD Simulation: Protein in Water ‎[20,691 bytes]
  320. (hist) ‎MD Simulation: Protein in Water (Pt. 2) ‎[20,848 bytes]
  321. (hist) ‎2018 AMBER tutorial with 1c87 ‎[21,865 bytes]
  322. (hist) ‎2020 AMS-536 Spring (revised syllabus) ‎[22,302 bytes]
  323. (hist) ‎2010 DOCK tutorial with Streptavidin ‎[22,311 bytes]
  324. (hist) ‎2016 AMBER tutorial with Beta Trypsin ‎[23,257 bytes]
  325. (hist) ‎2018 Denovo design tutorial 2 with PDB 1C87 ‎[23,409 bytes]
  326. (hist) ‎2020 Denovo tutorial 4 with PDBID 6UZW ‎[24,038 bytes]
  327. (hist) ‎2013 AMS-535 Fall ‎[25,104 bytes]
  328. (hist) ‎2009 AMBER tutorial with Trpcage ‎[25,374 bytes]
  329. (hist) ‎2015 AMBER tutorial with PARP ‎[25,411 bytes]
  330. (hist) ‎2014 AMS-535 Fall ‎[25,584 bytes]
  331. (hist) ‎2015 AMS-535 Fall ‎[26,374 bytes]
  332. (hist) ‎2008 AMS-535 Fall ‎[26,934 bytes]
  333. (hist) ‎2020 Denovo tutorial 2 with PDBID 2GQG ‎[26,981 bytes]
  334. (hist) ‎2016 AMS-535 Fall ‎[27,092 bytes]
  335. (hist) ‎2019 Denovo design tutorial 2 with PDB 2P16 ‎[27,260 bytes]
  336. (hist) ‎2017 AMS-535 Fall ‎[27,490 bytes]
  337. (hist) ‎2017 AMBER tutorial with 4qmz ‎[27,626 bytes]
  338. (hist) ‎2010 AMS-535 Fall ‎[28,065 bytes]
  339. (hist) ‎2012 AMS-535 Fall ‎[28,351 bytes]
  340. (hist) ‎2019 AMS-535 Fall ‎[28,421 bytes]
  341. (hist) ‎2018 AMS-535 Fall ‎[28,458 bytes]
  342. (hist) ‎2009 AMS-535 Fall ‎[28,510 bytes]
  343. (hist) ‎2011 AMS-535 Fall ‎[28,922 bytes]
  344. (hist) ‎2019 Denovo design tutorial 3 with PDB 3JQZ ‎[31,869 bytes]
  345. (hist) ‎2015 DOCK tutorial with Poly(ADP-ribose) polymerase (PARP) ‎[32,770 bytes]
  346. (hist) ‎2009 DOCK tutorial with neuraminidase ‎[32,930 bytes]
  347. (hist) ‎2019 AMBER tutorial with PDBID 2BXF ‎[32,977 bytes]
  348. (hist) ‎2018 AMBER tutorial with 2nnq ‎[33,318 bytes]
  349. (hist) ‎2014 AMBER tutorial with HIV Protease ‎[33,535 bytes]
  350. (hist) ‎2013 DOCK tutorial with Orotodine Monophosphate Decarboxylase ‎[33,738 bytes]
  351. (hist) ‎2019 DOCK tutorial 1 with PDBID 2BXF ‎[34,756 bytes]
  352. (hist) ‎2010 AMBER Tutorial with Biotin and Streptavidin ‎[35,122 bytes]
  353. (hist) ‎2013 AMBER Tutorial with UMP and OMP ‎[36,903 bytes]
  354. (hist) ‎2018 Denovo design tutorial 1 with PDB 2NNQ ‎[37,516 bytes]
  355. (hist) ‎2019 Denovo design tutorial 1 with PDB 2BXF ‎[39,711 bytes]
  356. (hist) ‎2011 AMBER Tutorial with Biotin and Streptavidin ‎[40,962 bytes]
  357. (hist) ‎2014 DOCK tutorial with HIV Protease ‎[41,249 bytes]
  358. (hist) ‎2017 Denovo design tutorial 1 with PDB 1BJU ‎[41,458 bytes]
  359. (hist) ‎DOCK Denovo Run ‎[41,595 bytes]
  360. (hist) ‎2017 Denovo design tutorial with PDB 1BJU ‎[41,621 bytes]
  361. (hist) ‎2017 Denovo design tutorial 2 with PDB 4QMZ ‎[44,860 bytes]
  362. (hist) ‎2016 DOCK tutorial with Beta Trypsin ‎[44,999 bytes]
  363. (hist) ‎2017 DOCK tutorial 2 with PDB 3GPL NEW ‎[46,100 bytes]
  364. (hist) ‎2020 DOCK tutorial 4 with PDBID 6UZW ‎[49,697 bytes]
  365. (hist) ‎2012 AMBER Tutorial with Biotin and Streptavidin ‎[50,704 bytes]
  366. (hist) ‎2018 DOCK tutorial 1 with PDBID 2NNQ ‎[53,597 bytes]
  367. (hist) ‎2012 DOCK tutorial with Streptavidin ‎[55,727 bytes]
  368. (hist) ‎2018 DOCK tutorial 2 with PDBID 1C87 ‎[55,817 bytes]
  369. (hist) ‎2019 DOCK tutorial 3 with PDBID 3JQZ ‎[56,603 bytes]
  370. (hist) ‎2019 DOCK tutorial 2 with PDBID 2P16 ‎[57,855 bytes]
  371. (hist) ‎2020 DOCK tutorial 3 with PDBID 4F4P ‎[58,602 bytes]
  372. (hist) ‎2020 DOCK tutorial 2 with PDBID 2GQG ‎[62,445 bytes]
  373. (hist) ‎2017 DOCK tutorial 1 with PDB 4QMZ NEW ‎[66,933 bytes]
  374. (hist) ‎2020 DOCK tutorial 1 with PDBID 3VJK ‎[69,212 bytes]

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