2017-2018 AMS-532 Fall-Spring
From Rizzo_Lab
Please see http://ringo.ams.sunysb.edu/~rizzo for Rizzo Group Homepage
Instructor | Dr. Robert C. Rizzo [631-632-9340, rizzorc@gmail.com] |
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Course No. | AMS-532 |
Location/Time | Physics Bldg. P117, Wed 12:00PM - 12:53PM |
Office Hours | Anytime or by appointment, Room 1-111, Dept. of Applied Math & Statistics |
Journal Club Schedule (Fall & Spring) and Responsible Conduct of Research Schedule (Spring)
2017 Fall | Participant | Rotations or Research Group | Topic | References
REFERENCES SHOULD USE J. AM. CHEM. SOC. FORMAT |
2017.08.30 Wed | Rizzo, Robert | -- | -- | Organizational Meeting |
2017.09.06 Wed | Fallon, Zach | -- | -- | Morin et al; Mechano-chemical kinetics of DNA replication: identification of the translocation step of a replicative DNA polymerase. Nucleic Acids Research 2015, 43, 3643-3652. |
2017.09.13 Wed | -- | -- | -- | AMS Grad Student BBQ |
2017.09.20 Wed | Nassar, Roy | -- | -- | MacCallum et al; Determining protein structures by combining semireliable data with atomistic physical models by Bayesian inference. PNAS 2015, 112, 6985-6990. |
2017.09.27 Wed | Ignatov, Misha | -- | -- | Smith et al; ANI-1: An extensible neural network potential with DFT accuracy at force field computational cost. Chemical Science 2017, 8, 3192–3203. |
2017.10.04 Wed | Cao, Xin | -- | -- | Coutsias et al; Exhaustive Conformational Sampling of Complex Fused Ring Macrocycles Using Inverse Kinematics. J. Chem. Theory. Comp. 2016, 12, 4674-4687. |
2017.10.11 Wed | Tang, Cathy | -- | -- | Sheng et al; Gene-Specific Substitution Profiles Describe the Types and Frequencies of Amino Acid Changes during Antibody Somatic Hypermutation. Frontiers in Immunology 2017, 8, Article 537. |
2017.10.18 Wed | Jones, George | -- | -- | Martin-Garcia et al; Serial femtosecond crystallography: A revolution in structural biology. Archives of Biochemistry and Biophysics 2016, 602, 32-47. |
2017.10.25 Wed | Carter, Jason | -- | -- | Li et al; Landscape of tumor-infiltrating T cell repertoire of human cancers. Nature Genetics 2016, 48, 725-732. |
2017.11.01 Wed | Telehany, Steve | -- | -- | Schmidt et al; Small-Molecule Inhibitors of Dengue-Virus Entry. PLOS Pathogens 2012, 8, e1002627 |
2017.11.08 Wed | Taouil, Adam | -- | -- | Woodcock et al; MSCALE: A General Utility for Multiscale Modeling. J. Chem. Theory. Comp. 2011, 7, 1208-1219. |
2017.11.15 Wed | Manathunga, Lakshan | -- | -- | Philips et al; LigandRNA: computational predictor of RNA-ligand interactions. RNA' 2013, 19, 1605-1616. |
2017.11.22 Wed | -- | -- | -- | THANKSGIVING BREAK |
2017.11.29 Wed | Talis, Emma | -- | -- | Oprea et al; Somatic Mutations Leads to Efficient Affinity Maturation When Centrocytes Recycle Back to Centroblasts. J. Immunology. 1997, 158, 5155-5162. |
2017.12.06 Wed | Maria Spyrou, Ioanna | -- | -- | Berg et al; Structure and evolution of protein interaction networks: a statistical model for link dynamics and gene duplication. BMC Evolutionary Biology. 2004, 4, 51. |
2018 Spring | Participant | Rotations or Research Group | Topic | References
SEMESTER STARTS WITH RESPONSIBLE CONDUCT OF RESEARCH |
2018.01.24 Wed | Class discussion | Responsible Conduct of Research (RCR) | (1) Course Overview: Fulfilling Responsible Conduct in Research Training |
Discussion of Overall Course Requirements which include:
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2018.01.31 Wed | Class discussion | Responsible Conduct of Research (RCR) | (2) Integrity in Scholarship (Introduction to Ethics and Science) |
Stony Brook Lecture
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2018.02.07 Wed | Class discussion | Responsible Conduct of Research (RCR) | (3) Scientific Misconduct |
Stony Brook Lecture
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2018.02.14 Wed | Class discussion | Responsible Conduct of Research (RCR) | (4) Mentoring |
Stony Brook Lecture
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2018.02.21 Wed | Class discussion | Responsible Conduct of Research (RCR) | (5) Ownership and Authorship |
Stony Brook Lecture
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2018.02.28 Wed | Class discussion | Responsible Conduct of Research (RCR) | (6) Plagiarism |
Stony Brook Lecture
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2018.03.07 Wed | -- | -- | -- | SNOW DAY |
2018.03.14 Wed | -- | -- | -- | SPRING BREAK |
2018.03.21 Wed | -- | -- | -- | SNOW DAY |
2018.03.28 Wed | Class discussion | Responsible Conduct of Research (RCR) | (7) Data Management |
Stony Brook Lecture
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2018.04.04 Wed | Class discussion | Responsible Conduct of Research (RCR) | (8) Journalism and Science |
Stony Brook Lecture
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2018.04.11 Wed | Class discussion | Responsible Conduct of Research (RCR) | (9) Responsible Conduct of Research Involving Human Subjects |
Stony Brook Lecture
Discussion
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2018.04.18 Wed | Class discussion | Responsible Conduct of Research (RCR) | (10) Responsible Conduct of Research Involving Laboratory Animals |
Stony Brook Lecture
Discussion
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2018.04.25 Wed | -- | -- | -- | ROTATION/RESEARCH PRESENTATIONS |
2018.05.02 Wed | -- | -- | -- | ROTATION/RESEARCH PRESENTATIONS |