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- Semester Checklist
- Sequence alignment
- Server Administration
- Setting up RSA SecureID token
- Setting up insurance through Research Foundation
- Setup ssh tunnel to NYBlue fen
- Showbox.in
- Showsph.in
- Slick awk tricks
- Small Molecule Evolution (DOCK GA)
- Sphere Generation
- Stony Brook Joint Group Meetings in Computational Structural Biology
- Stonybrook
- Stupid awk tricks
- Submitting BlueGene Jobs
- TIMD extraction.py
- TIMD integration.py
- TIMD integration prep.py
- Test Page
- Test Set Construction SB2024 V1 DOCK6.10 A
- Test Set Tutorial
- Testset Objectives
- Testset Protocols
- Torsion environment
- Tutorials
- Ubq md.mdp
- Ubq min.mdp
- Ubq npt.mdp
- Ubq nvt.mdp
- Unix
- Unix find
- Useful Slurm Commands
- Using convert command unix
- VMD
- Valgrind
- Vi
- Virtual Screening Compound Ordering SOP
- Virtual Screening Protocol
- Virtual Screening Protocol on BlueGene (IGF-IR system)
- Visiting BNL
- Vmd.rmsd.csh
- Ways to remove the first line
- Which Unix Distribution?
- Wiki Editing
- With t4 step1 inputgen.bash
- With t4 step2 equiprod.bash
- With t4 step2 min.bash
- With t4 step3 inputgen.bash
- X-Win32
- Xmgrace