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- 14:07, 9 March 2020 (diff | hist) . . (+8) . . DOCK DN Tutorials
- 14:07, 9 March 2020 (diff | hist) . . (+168) . . DOCK DN Tutorials
- 11:52, 5 February 2020 (diff | hist) . . (+169) . . DOCK VS Tutorials
- 13:14, 3 February 2020 (diff | hist) . . (+71) . . Analysis Tools Repository (→Single Footprint Plot using DOCK output) (top)
- 13:11, 3 February 2020 (diff | hist) . . (0) . . N File:Fps.min.output footprint scored rigid3-compressor-min.jpg (top)
- 12:26, 23 January 2020 (diff | hist) . . (-1) . . Analysis Tools Repository (→Single Footprint Plot using DOCK output)
- 12:20, 23 January 2020 (diff | hist) . . (+1) . . Analysis Tools Repository (→Single Footprint Plot using DOCK output)
- 12:19, 23 January 2020 (diff | hist) . . (+21) . . N File:Fps.min.output footprint scored rigid2.png (new footprint example) (top)
- 12:15, 23 January 2020 (diff | hist) . . (0) . . File:Fps.min.output footprint scored rigid.png (Stelehany uploaded a new version of File:Fps.min.output footprint scored rigid.png) (top)
- 12:13, 23 January 2020 (diff | hist) . . (+94) . . Analysis Tools Repository (→Single Footprint Plot using DOCK output)
- 12:11, 23 January 2020 (diff | hist) . . (+45) . . N File:Fps.min.output footprint scored rigid.png (example output from footprint plotting script)
- 12:08, 23 January 2020 (diff | hist) . . (-3) . . Analysis Tools Repository (→Single Footprint Plot using DOCK output)
- 12:07, 23 January 2020 (diff | hist) . . (+180) . . Analysis Tools Repository (→Single Footprint Plot using DOCK output)
- 12:05, 23 January 2020 (diff | hist) . . (+3,389) . . Analysis Tools Repository (→Single Footprint Plot using DOCK output)
- 11:27, 22 January 2020 (diff | hist) . . (-2) . . 2020 AMS-536 Spring
- 11:27, 22 January 2020 (diff | hist) . . (0) . . 2020 AMS-536 Spring
- 11:26, 22 January 2020 (diff | hist) . . (+154) . . 2020 AMS-536 Spring
- 11:23, 22 January 2020 (diff | hist) . . (+103) . . 2020 AMS-536 Spring
- 11:08, 22 January 2020 (diff | hist) . . (0) . . 2019 AMS-536 Spring (top)
- 11:07, 22 January 2020 (diff | hist) . . (-87) . . 2020 AMS-536 Spring
- 10:57, 22 January 2020 (diff | hist) . . (+7,580) . . N 2020 AMS-536 Spring (Created page with "<br> {| align="center" border="2" cellpadding="8" cellspacing="0" style="background:white; text-align:left; width:80%" |- style="background:white" ! style="width:10%" | '''Ins...")
- 10:56, 22 January 2020 (diff | hist) . . (+25) . . AMS-536 Molecular Modeling of Biological Molecules (→Course Schedules)
- 10:04, 21 January 2020 (diff | hist) . . (+175) . . Analysis Tools Repository
- 09:48, 15 January 2020 (diff | hist) . . (+140) . . Analysis Tools Repository (→Analyses)
- 09:19, 15 January 2020 (diff | hist) . . (+74) . . Analysis Tools Repository (→How to add new analysis/what should each entry contain)
- 09:18, 15 January 2020 (diff | hist) . . (+648) . . Analysis Tools Repository (→What is this repository?)
- 09:10, 15 January 2020 (diff | hist) . . (+396) . . Analysis Tools Repository (→Using this repository)
- 10:48, 14 November 2019 (diff | hist) . . (+57) . . Rizzo Lab Publications
- 11:52, 12 November 2019 (diff | hist) . . (+138) . . Rizzo Lab Publications
- 15:01, 1 November 2019 (diff | hist) . . (+165) . . DOCK DN Development Goals (→List of features/ideas for future releases:)
- 11:22, 23 September 2019 (diff | hist) . . (+68) . . DOCK VS Development Goals
- 11:21, 23 September 2019 (diff | hist) . . (+141) . . DOCK VS Development Goals
- 11:14, 23 September 2019 (diff | hist) . . (+84) . . DOCK VS Development Goals
- 11:30, 13 February 2019 (diff | hist) . . (-1) . . Rizzo Lab Publications
- 11:29, 13 February 2019 (diff | hist) . . (+49) . . Rizzo Lab Publications
- 11:27, 13 February 2019 (diff | hist) . . (+41) . . Rizzo Lab Publications
- 11:25, 13 February 2019 (diff | hist) . . (+3,348) . . Rizzo Lab Publications
- 15:35, 11 February 2019 (diff | hist) . . (0) . . N File:NITD008 structure.png (top)
- 13:31, 7 February 2019 (diff | hist) . . (+1) . . 2019 AMS-536 Spring (→Tutorials, Software Links, and Other Relevant Class Information)
- 13:30, 7 February 2019 (diff | hist) . . (+117) . . 2019 AMS-536 Spring (→Tutorials, Software Links, and Other Relevant Class Information)
- 11:47, 7 February 2019 (diff | hist) . . (+96) . . DOCK DN Development Goals (→Current Coding Progress:)
- 10:39, 7 February 2019 (diff | hist) . . (+43) . . N DOCK VS Development Goals (Created page with "* Remove secondary scoring function options")
- 10:34, 7 February 2019 (diff | hist) . . (+3) . . DOCK DN Development Goals (→Current Coding Progress:)
- 10:32, 7 February 2019 (diff | hist) . . (+45) . . DOCK DN Development Goals (→List of features/ideas for future releases:)
- 10:31, 7 February 2019 (diff | hist) . . (+166) . . DOCK DN Development Goals (→List of features/ideas for future releases:)
- 10:26, 7 February 2019 (diff | hist) . . (+480) . . N DOCK Release Objectives (Created page with "DOCK 6.10 To do list *(1)Update the FMS and FPS test cases *(2)Change variables in the FMS and FPS *(3)Merge all the changes with the latest CVS version for testing *(4)Up...")
- 10:26, 7 February 2019 (diff | hist) . . (-3) . . Developer's Info (top)
- 09:48, 6 February 2019 (diff | hist) . . (+153) . . Chimera (top)
- 09:47, 6 February 2019 (diff | hist) . . (+215) . . Chimera
- 09:46, 6 February 2019 (diff | hist) . . (+153) . . 2019 AMS-536 Spring
- 09:44, 6 February 2019 (diff | hist) . . (+426) . . 2019 AMS-536 Spring
- 10:59, 5 February 2019 (diff | hist) . . (-29) . . Rizzo Lab Information and Tutorials
- 10:58, 5 February 2019 (diff | hist) . . (-236) . . Advanced Dock Utilities/Information (top)
- 10:58, 5 February 2019 (diff | hist) . . (+132) . . N General Dock Utilities/Info (Created page with "*DOCK Installation *Optimize Polar Hydrogens *Footprint Plot Visualization *Sphere Generation *Scoring Functions") (top)
- 10:58, 5 February 2019 (diff | hist) . . (+99) . . N DOCK DN Utilities/Info (Created page with "*Fragment Library Generation *Make Unique script usage *Analog Library - Pubchem & Zinc") (top)
- 10:57, 5 February 2019 (diff | hist) . . (+31) . . N DOCK VS Utilities/Info (Created page with "*Virtual Screening Protocol") (top)
- 10:57, 5 February 2019 (diff | hist) . . (+261) . . Advanced Dock Utilities/Information
- 10:56, 5 February 2019 (diff | hist) . . (-23) . . Rizzo Lab Information and Tutorials
- 10:55, 5 February 2019 (diff | hist) . . (+23) . . General Dock Utilities (top)
- 10:55, 5 February 2019 (diff | hist) . . (+362) . . N Advanced Dock Utilities/Information (Created page with "This page outlines advanced preparation and post processing techniques used regularly in our lab {| cellpadding=0 width=90% *DOCK_VS Utilities - Traditional Virtual Screen...")
- 10:54, 5 February 2019 (diff | hist) . . (+41) . . Rizzo Lab Information and Tutorials
- 10:54, 5 February 2019 (diff | hist) . . (-12) . . Rizzo Lab Information and Tutorials
- 10:53, 5 February 2019 (diff | hist) . . (+12) . . Rizzo Lab Information and Tutorials
- 10:52, 5 February 2019 (diff | hist) . . (-2) . . Rizzo Lab Members and Contact Information
- 10:51, 5 February 2019 (diff | hist) . . (+98) . . Rizzo Lab Members and Contact Information
- 10:48, 5 February 2019 (diff | hist) . . (-63) . . Rizzo Lab Information and Tutorials
- 10:48, 5 February 2019 (diff | hist) . . (+63) . . Legacy Info (top)
- 10:45, 5 February 2019 (diff | hist) . . (-45) . . Rizzo Lab Information and Tutorials
- 10:45, 5 February 2019 (diff | hist) . . (+21) . . N DOCK VS Parameters (Created page with "*Sampling Methods") (top)
- 10:44, 5 February 2019 (diff | hist) . . (+23) . . General Dock Utilities
- 10:43, 5 February 2019 (diff | hist) . . (-156) . . Rizzo Lab Information and Tutorials
- 10:43, 5 February 2019 (diff | hist) . . (+86) . . N General Dock Utilities (Created page with "*DOCK Installation *Optimize Polar Hydrogens *Footprint Plot Visualization")
- 10:43, 5 February 2019 (diff | hist) . . (+31) . . N DOCK VS Utilities (Created page with "*Virtual Screening Protocol") (top)
- 10:42, 5 February 2019 (diff | hist) . . (+37) . . DOCK DN Utilities (top)
- 10:41, 5 February 2019 (diff | hist) . . (-93) . . Rizzo Lab Information and Tutorials
- 10:41, 5 February 2019 (diff | hist) . . (+62) . . N DOCK DN Utilities (Created page with "*Fragment Library Generation *Make Unique script usage")
- 10:41, 5 February 2019 (diff | hist) . . (+362) . . N Advanced Dock Utilities (Created page with "This page outlines advanced preparation and post processing techniques used regularly in our lab {| cellpadding=0 width=90% *DOCK_VS Utilities - Traditional Virtual Screen...") (top)
- 10:39, 5 February 2019 (diff | hist) . . (+29) . . Rizzo Lab Information and Tutorials
- 10:38, 5 February 2019 (diff | hist) . . (-30) . . De Novo Design (DOCK DN) (top)
- 10:38, 5 February 2019 (diff | hist) . . (-40) . . Rizzo Lab Information and Tutorials
- 10:37, 5 February 2019 (diff | hist) . . (+104) . . N DOCK GA Input File(s) (Created page with "*Example of an Single Molecule Evolution Input file *Example of an Ensemble Evolution Input file") (top)
- 10:37, 5 February 2019 (diff | hist) . . (+8,420) . . N DOCK DN Input File(s) (Created page with "This is a standard input file for de novo DOCK6 using multigrid score through descriptor score. conformer_search_type denovo dn_fragl...") (top)
- 10:36, 5 February 2019 (diff | hist) . . (+273) . . N Example Input Files (Created page with "{| cellpadding=0 width=90% *DOCK_VS Input File(s) - Traditional Virtual Screening Development *DOCK_DN Input File(s) - De Novo Design Development *DOCK_GA Input File...") (top)
- 10:35, 5 February 2019 (diff | hist) . . (+25) . . Rizzo Lab Information and Tutorials
- 10:35, 5 February 2019 (diff | hist) . . (-20) . . De Novo Design (DOCK DN)
- 10:34, 5 February 2019 (diff | hist) . . (-28) . . Small Molecule Evolution (DOCK GA) (top)
- 10:34, 5 February 2019 (diff | hist) . . (+4,724) . . N DOCK GA Parameters (Created page with " {| class="wikitable" |+ |- ! Parameter ! Description ! Default Value |- | ga_molecule_file | Initial molecule ensemble in mol2 format || - |- | ga_fraglib_scaffold_file |...")
- 10:33, 5 February 2019 (diff | hist) . . (+3,030) . . N DOCK DN Parameters (Created page with " {| class="wikitable" |- ! Parameter ! Description ! Default |- | conformer_search_type | Choose between flex, rigid, denovo, or genetic | Flex |- | dn_fraglib_scaffold_file |...")
- 10:33, 5 February 2019 (diff | hist) . . (+259) . . N Parameter List/Explanations (Created page with "{| cellpadding=0 width=90% *DOCK_VS Parameters - Traditional Virtual Screening Parameters *DOCK_DN Parameters - De Novo Design Parameters *DOCK_GA Parameters - Ge...")
- 10:31, 5 February 2019 (diff | hist) . . (+33) . . Rizzo Lab Information and Tutorials
- 10:30, 5 February 2019 (diff | hist) . . (-32) . . Small Molecule Evolution (DOCK GA)
- 10:30, 5 February 2019 (diff | hist) . . (+1,083) . . N DOCK GA Development Goals (Created page with "==To Do List== -xover- guided based on score 1. good v good 2. bad v good 3. bad v bad nonexhaustive xover (pick subset of xover based on probability) 2-3 point xove...")
- 10:30, 5 February 2019 (diff | hist) . . (-32) . . De Novo Design (DOCK DN)
- 10:29, 5 February 2019 (diff | hist) . . (+6,743) . . N DOCK DN Development Goals (Created page with "This is the Rizzo lab wiki page for coordinating bugs and progress on the de novo project. <br> === Valgrind clean version of the code on cluster that Rizzo lab should be usi...")
- 10:29, 5 February 2019 (diff | hist) . . (-13) . . Rizzo Lab Information and Tutorials
- 10:29, 5 February 2019 (diff | hist) . . (+480) . . N General Dock Development Goals (Created page with "DOCK 6.10 To do list *(1)Update the FMS and FPS test cases *(2)Change variables in the FMS and FPS *(3)Merge all the changes with the latest CVS version for testing *(4)Up...") (top)
- 10:28, 5 February 2019 (diff | hist) . . (+430) . . N Developer's Info (Created page with "DOCK to-do list to keep track of progress for upcoming releases {| cellpadding=0 width=90% *DOCK_VS Development Goals - Traditional Virtual Screening Development *DOCK_...")
- 10:24, 5 February 2019 (diff | hist) . . (+22) . . Rizzo Lab Information and Tutorials
- 10:23, 5 February 2019 (diff | hist) . . (-59) . . Rizzo Lab Information and Tutorials
- 10:21, 5 February 2019 (diff | hist) . . (0) . . Rizzo Lab Information and Tutorials
- 10:19, 5 February 2019 (diff | hist) . . (+12) . . DOCK VS Tutorials
- 12:12, 4 February 2019 (diff | hist) . . (+91) . . Testset Protocols (top)
- 12:07, 4 February 2019 (diff | hist) . . (-26) . . De Novo Design (DOCK DN)
- 12:06, 4 February 2019 (diff | hist) . . (-26) . . Small Molecule Evolution (DOCK GA)
- 12:06, 4 February 2019 (diff | hist) . . (+3,441) . . N DOCK DN Benchmarking (Created page with "{| align="center" border="1" cellpadding="8" cellspacing="0" style="background:white; text-align:left; width:95%" |- style="background:cornflowerblue" | <center>'''Date, Autho...") (top)
- 12:05, 4 February 2019 (diff | hist) . . (-6,460) . . Benchmarking (Replaced content with "{| cellpadding=0 width=90% *DOCK_VS Benchmarking - Traditional Virtual Screening *DOCK_DN Benchmarking - De Novo Design *DOCK_GA Benchmarking - Genetic Algorit...") (top)
- 12:05, 4 February 2019 (diff | hist) . . (+6,458) . . N DOCK VS Benchmarking (Created page with "'''ABBREVIATIONS:''' PR = Pose Reproduction VS = Virtual Screening desc = Descriptor Score Grid = Grid Score MG = Multi Grid Score Ph4 = Pharmacophore Score HUN = Hunga...")
- 12:04, 4 February 2019 (diff | hist) . . (+223) . . Benchmarking
- 12:02, 4 February 2019 (diff | hist) . . (-554) . . DOCK VS Tutorials
- 11:57, 4 February 2019 (diff | hist) . . (-2) . . Rizzo Lab Information and Tutorials (→DOCK)
- 11:57, 4 February 2019 (diff | hist) . . (+53) . . Rizzo Lab Information and Tutorials (→DOCK)
- 11:55, 4 February 2019 (diff | hist) . . (+25) . . Rizzo Lab Information and Tutorials (→DOCK)
- 11:51, 4 February 2019 (diff | hist) . . (+6,458) . . N Benchmarking (Created page with "'''ABBREVIATIONS:''' PR = Pose Reproduction VS = Virtual Screening desc = Descriptor Score Grid = Grid Score MG = Multi Grid Score Ph4 = Pharmacophore Score HUN = Hunga...")
- 11:51, 4 February 2019 (diff | hist) . . (-5) . . Rizzo Lab Information and Tutorials (→DOCK)
- 11:51, 4 February 2019 (diff | hist) . . (-20) . . Rizzo Lab Information and Tutorials (→DOCK)
- 11:50, 4 February 2019 (diff | hist) . . (+1) . . Tutorials
- 11:50, 4 February 2019 (diff | hist) . . (+497) . . Tutorials
- 11:49, 4 February 2019 (diff | hist) . . (-243) . . De Novo Design (DOCK DN)
- 11:48, 4 February 2019 (diff | hist) . . (+242) . . N DOCK DN Tutorials (Created page with "*2018 Denovo design tutorial 1 with PDB 2NNQ *2018 Denovo design tutorial 2 with PDB 1C87 *2017 Denovo design tutorial 1 with PDB 1BJU *2017 Denovo design tutori...")
- 11:47, 4 February 2019 (diff | hist) . . (+1,294) . . N DOCK VS Tutorials (Created page with "*2019 DOCK tutorial 1 with PDBID *2019 DOCK tutorial 2 with PDBID *2019 DOCK tutorial 3 with PDBID *2018 DOCK tutorial 1 with PDBID 2NNQ *2018 DOCK tutori...")
- 11:47, 4 February 2019 (diff | hist) . . (+8) . . Tutorials
- 11:46, 4 February 2019 (diff | hist) . . (+80) . . Tutorials
- 11:45, 4 February 2019 (diff | hist) . . (+121) . . N Tutorials (Created page with "{| cellpadding=0 width=90% *DOCK_VS Tutorials *DOCK_DN Tutorials *DOCK_GA Tutorials *DOCK_CV Tutorials |}")
- 11:42, 4 February 2019 (diff | hist) . . (+15) . . Rizzo Lab Information and Tutorials (→DOCK)
- 11:35, 4 February 2019 (diff | hist) . . (0) . . Rizzo Lab Information and Tutorials (→DOCK)
- 11:33, 4 February 2019 (diff | hist) . . (-3) . . Rizzo Lab Information and Tutorials (→Docking)
- 11:31, 4 February 2019 (diff | hist) . . (+2,577) . . N DOCK Installation (Created page with "For the AMS 536 class, DOCK is already installed. This article is for users trying to install dock elsewhere. Please note that DOCK is licensed software; please contact UCSF f...") (top)
- 11:31, 4 February 2019 (diff | hist) . . (+2) . . Rizzo Lab Information and Tutorials (→Docking)
- 11:31, 4 February 2019 (diff | hist) . . (-23) . . Rizzo Lab Information and Tutorials (→Docking)
- 11:30, 4 February 2019 (diff | hist) . . (+1) . . Installing DOCK (top)
- 11:29, 4 February 2019 (diff | hist) . . (+1,440) . . Installing DOCK
- 11:23, 4 February 2019 (diff | hist) . . (-74) . . Rizzo Lab Information and Tutorials (→Miscellaneous)
- 11:23, 4 February 2019 (diff | hist) . . (+74) . . Legacy Info
- 11:22, 4 February 2019 (diff | hist) . . (+4,021) . . N Automated Family generation from PDB (Created page with "This is under construction: Things to come: description of actual step-by-step protocol ( a numbered list) and inclusion of screen shots along with specific examples of...") (top)
- 11:22, 4 February 2019 (diff | hist) . . (-19) . . Rizzo Lab Information and Tutorials (→Databases)
- 11:21, 4 February 2019 (diff | hist) . . (+3,493) . . N Analog Library - Pubchem & Zinc (Created page with "Hello! This short write up is designed to make it easier for the group and other users that may stumble across this writeup curate a library of compounds analogous to compound...") (top)
- 11:20, 4 February 2019 (diff | hist) . . (-60) . . Rizzo Lab Information and Tutorials (→Docking)
- 11:20, 4 February 2019 (diff | hist) . . (+60) . . BlueGene (top)
- 11:19, 4 February 2019 (diff | hist) . . (-20) . . Rizzo Lab Information and Tutorials (→Docking)
- 11:15, 4 February 2019 (diff | hist) . . (+25) . . Legacy Info
- 11:14, 4 February 2019 (diff | hist) . . (-25) . . Rizzo Lab Information and Tutorials (→Miscellaneous)
- 11:14, 4 February 2019 (diff | hist) . . (-19) . . Rizzo Lab Information and Tutorials (→Miscellaneous)
- 11:13, 4 February 2019 (diff | hist) . . (-325) . . Legacy Info (Replaced content with "*Xmgrace *BlueGene")
- 11:13, 4 February 2019 (diff | hist) . . (-15) . . BlueGene (→BlueGene)
- 11:13, 4 February 2019 (diff | hist) . . (+323) . . N BlueGene (Created page with "== BlueGene == {| cellpadding=0 width=90% *Setup ssh tunnel to NYBlue fen *Get time estimate for free blocks *Get Job ids to use for llcancel *Submitting BlueGen...")
- 11:13, 4 February 2019 (diff | hist) . . (+339) . . Legacy Info
- 11:12, 4 February 2019 (diff | hist) . . (-325) . . Rizzo Lab Information and Tutorials (→BlueGene)
- 11:10, 4 February 2019 (diff | hist) . . (+2,557) . . N Formatting your Thesis (Created page with " For more tutorials from the Rizzo Group go here: Rizzo Lab Information and Tutorials This is ment to aid in formating a thesis or diseratation. For gratuate students at...") (top)
- 11:10, 4 February 2019 (diff | hist) . . (+973) . . N Setting up insurance through Research Foundation (Created page with "For information about the RA insurance go here [http://www.stonybrook.edu/hr/benefits/rf/student.shtml] For the vision reimbursement form go here [http://naples.cc.stonybrook...") (top)
- 11:09, 4 February 2019 (diff | hist) . . (+55) . . Rizzo Lab Information and Tutorials (→Miscellaneous)
- 11:08, 4 February 2019 (diff | hist) . . (-60) . . Rizzo Lab Information and Tutorials (→Formating Word Documents)
- 11:08, 4 February 2019 (diff | hist) . . (+26) . . Rizzo Lab Information and Tutorials (→Miscellaneous)
- 11:07, 4 February 2019 (diff | hist) . . (+1) . . Rizzo Lab Information and Tutorials (→Archive)
- 11:07, 4 February 2019 (diff | hist) . . (+1) . . Rizzo Lab Information and Tutorials (→Insurance)
- 11:07, 4 February 2019 (diff | hist) . . (+1) . . Rizzo Lab Information and Tutorials (→Formating Word Documents)
- 11:06, 4 February 2019 (diff | hist) . . (-4) . . Rizzo Lab Information and Tutorials (→Setting up accounts)
- 11:05, 4 February 2019 (diff | hist) . . (-15) . . Rizzo Lab Information and Tutorials (→BlueGene)
- 11:05, 4 February 2019 (diff | hist) . . (-12) . . Rizzo Lab Information and Tutorials (→Molecular Dynamics)
- 11:04, 4 February 2019 (diff | hist) . . (-6) . . Rizzo Lab Information and Tutorials (→Docking)
- 11:03, 4 February 2019 (diff | hist) . . (-6) . . Rizzo Lab Information and Tutorials (→Basic Linux Tools)
- 11:03, 4 February 2019 (diff | hist) . . (-9) . . Rizzo Lab Information and Tutorials (→Basic Linux Tools)
- 11:01, 4 February 2019 (diff | hist) . . (+2,188) . . N Slick awk tricks (Created page with "Grep out the wallclock time from the namd out files, convert to hours and adds them together. grep "WallClock:" *.out | awk '{sum+=$2/3600} END {print "Hours="sum}' Same thi...") (top)
- 11:01, 4 February 2019 (diff | hist) . . (-1) . . Rizzo Lab Information and Tutorials (→Basic Linux Tools)
- 10:58, 4 February 2019 (diff | hist) . . (+12) . . N Legacy Info (Created page with "*Xmgrace")
- 10:58, 4 February 2019 (diff | hist) . . (-2) . . Rizzo Lab Information and Tutorials (→Archive)
- 10:57, 4 February 2019 (diff | hist) . . (-14) . . Rizzo Lab Information and Tutorials (→Analysis Tools)
- 10:54, 4 February 2019 (diff | hist) . . (+13) . . N Outdated Info (Created page with "* Xmgrace") (top)
- 10:51, 4 February 2019 (diff | hist) . . (+18) . . Rizzo Lab Information and Tutorials
- 10:50, 4 February 2019 (diff | hist) . . (+13) . . Rizzo Lab Information and Tutorials
- 14:26, 30 January 2019 (diff | hist) . . (+114) . . DOCK Tutorials (top)
- 20:54, 3 December 2018 (diff | hist) . . (+2) . . 2018 AMS-535 Fall (top)
- 15:05, 3 December 2018 (diff | hist) . . (+20) . . 2018 AMS-535 Fall
- 14:59, 3 December 2018 (diff | hist) . . (+34) . . 2018 AMS-535 Fall
- 09:49, 3 December 2018 (diff | hist) . . (+16) . . 2018 AMS-535 Fall
- 09:57, 27 November 2018 (diff | hist) . . (+24) . . 2018 AMS-535 Fall
- 09:58, 20 November 2018 (diff | hist) . . (+19) . . 2018 AMS-535 Fall
- 16:58, 13 November 2018 (diff | hist) . . (+16) . . 2018 AMS-535 Fall
- 10:25, 13 November 2018 (diff | hist) . . (+26) . . 2018 AMS-535 Fall
- 14:12, 12 November 2018 (diff | hist) . . (0) . . 2018 DOCK tutorial 2 with PDBID 1C87 (top)
- 10:44, 7 November 2018 (diff | hist) . . (+48) . . 2018 AMS-535 Fall
- 10:39, 1 November 2018 (diff | hist) . . (+14) . . 2018 AMS-535 Fall
- 09:36, 31 October 2018 (diff | hist) . . (+15) . . 2018 AMS-535 Fall
- 12:22, 30 October 2018 (diff | hist) . . (+18) . . 2018 AMS-535 Fall
- 09:58, 23 October 2018 (diff | hist) . . (+31) . . 2018 AMS-535 Fall
- 12:51, 17 October 2018 (diff | hist) . . (+69) . . 2018 AMS-535 Fall
- 08:48, 11 October 2018 (diff | hist) . . (+15) . . 2018 AMS-535 Fall
- 14:25, 10 October 2018 (diff | hist) . . (+19) . . 2018 AMS-535 Fall
- 13:12, 8 October 2018 (diff | hist) . . (+20) . . 2018 AMS-535 Fall
- 09:35, 2 October 2018 (diff | hist) . . (+23) . . 2018 AMS-535 Fall
- 14:43, 1 October 2018 (diff | hist) . . (+37) . . 2018 AMS-535 Fall
- 10:24, 27 September 2018 (diff | hist) . . (0) . . 2018 AMS-535 Fall
- 10:23, 27 September 2018 (diff | hist) . . (+34) . . 2018 AMS-535 Fall
- 08:47, 10 September 2018 (diff | hist) . . (+10) . . 2018 AMS-535 Fall
- 11:14, 7 September 2018 (diff | hist) . . (+520) . . Footprint Plot Visualization (top)
- 11:10, 7 September 2018 (diff | hist) . . (+128) . . N Footprint Plot Visualization (Created page with "[http://ringo.ams.sunysb.edu/downloads/SB2010/plot_footprint_script/plot_footprint_single_magnitude.py plot_footprint_script.py]")
- 15:38, 6 September 2018 (diff | hist) . . (+2) . . 2017 Denovo design tutorial 2 with PDB 4QMZ
- 15:38, 6 September 2018 (diff | hist) . . (+2) . . 2017 Denovo refine tutorial with PDB 1BJU
- 15:37, 6 September 2018 (diff | hist) . . (+2) . . 2017 Denovo design tutorial 1 with PDB 1BJU
- 15:36, 6 September 2018 (diff | hist) . . (+4) . . 2018 Denovo design tutorial 2 with PDB 1C87
- 15:36, 6 September 2018 (diff | hist) . . (+2) . . 2018 Denovo design tutorial 1 with PDB 2NNQ
- 15:35, 6 September 2018 (diff | hist) . . (+3) . . Make Unique script usage (top)
- 15:33, 6 September 2018 (diff | hist) . . (-61) . . Rizzo Lab Information and Tutorials (→De novo Design using DOCK)
- 15:32, 6 September 2018 (diff | hist) . . (+413) . . N De Novo Design (Created page with "*Parameter List *Fragment Library Generation *Example of an Input file *De novo Developer Progress *De novo Benchmarking *Make Unique script usage *2...")
- 15:31, 6 September 2018 (diff | hist) . . (-18) . . Rizzo Lab Information and Tutorials
- 15:31, 6 September 2018 (diff | hist) . . (+79) . . Rizzo Lab Information and Tutorials
- 15:30, 6 September 2018 (diff | hist) . . (-50) . . Rizzo Lab Information and Tutorials (Undo revision 11077 by Stelehany (talk))
- 15:30, 6 September 2018 (diff | hist) . . (+50) . . Rizzo Lab Information and Tutorials
- 15:28, 6 September 2018 (diff | hist) . . (-79) . . Rizzo Lab Information and Tutorials
- 15:27, 6 September 2018 (diff | hist) . . (+413) . . N De Novo Design (previously NOVA) (Created page with "*Parameter List *Fragment Library Generation *Example of an Input file *De novo Developer Progress *De novo Benchmarking *Make Unique script usage *2...") (top)
- 15:27, 6 September 2018 (diff | hist) . . (+38) . . Rizzo Lab Information and Tutorials
- 13:46, 6 September 2018 (diff | hist) . . (+2) . . Example of an Input file (top)
- 13:45, 6 September 2018 (diff | hist) . . (+2) . . Parameter List
- 13:44, 6 September 2018 (diff | hist) . . (-21) . . Rizzo Lab Information and Tutorials (→De novo Design using DOCK)
- 13:43, 6 September 2018 (diff | hist) . . (+21) . . Rizzo Lab Information and Tutorials (→De novo Design using DOCK)
- 09:29, 5 September 2018 (diff | hist) . . (+20) . . Make Unique script usage
- 12:13, 4 September 2018 (diff | hist) . . (+22) . . Make Unique script usage
- 12:12, 4 September 2018 (diff | hist) . . (+7) . . Make Unique script usage
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- 13:57, 29 August 2018 (diff | hist) . . (0) . . 2018 AMS-535 Fall
- 13:52, 29 August 2018 (diff | hist) . . (0) . . 2018 AMS-535 Fall
- 13:51, 29 August 2018 (diff | hist) . . (+41) . . 2018 AMS-535 Fall
- 13:46, 29 August 2018 (diff | hist) . . (+41) . . 2018 AMS-535 Fall
- 10:02, 29 August 2018 (diff | hist) . . (+3) . . Make Unique script usage
- 09:36, 27 August 2018 (diff | hist) . . (-729) . . Rizzo Lab Members and Contact Information (→CURRENT MEMBERS)
- 09:35, 27 August 2018 (diff | hist) . . (-87) . . Rizzo Lab Members and Contact Information (→FORMER MEMBERS)
- 09:33, 27 August 2018 (diff | hist) . . (+24) . . Rizzo Lab Members and Contact Information (→FORMER MEMBERS)
- 09:32, 27 August 2018 (diff | hist) . . (-52) . . Rizzo Lab Members and Contact Information (→FORMER MEMBERS)
- 09:31, 27 August 2018 (diff | hist) . . (-85) . . Rizzo Lab Members and Contact Information (→FORMER MEMBERS)
- 09:30, 27 August 2018 (diff | hist) . . (+760) . . Rizzo Lab Members and Contact Information (→FORMER MEMBERS)
- 09:28, 27 August 2018 (diff | hist) . . (-1) . . Rizzo Lab Members and Contact Information (→CURRENT MEMBERS)
- 09:27, 27 August 2018 (diff | hist) . . (-1) . . Rizzo Lab Members and Contact Information (→CURRENT MEMBERS)
- 09:27, 27 August 2018 (diff | hist) . . (+131) . . Rizzo Lab Members and Contact Information (→CURRENT MEMBERS)
- 11:40, 25 July 2018 (diff | hist) . . (+473) . . N Make Unique script usage (Created page with "This page will deal with a component of our post processing procedure for the NOVA algorithm. Typically, during a de novo experiment, multiple copies of the same molecule will...")
- 11:13, 25 July 2018 (diff | hist) . . (+30) . . NOVA (Navigation and Optimization for Virtual Assembly) (top)
- 09:36, 22 May 2018 (diff | hist) . . (+5) . . 3D Analog Library Generation Using Pubchem and Zinc (top)
- 09:34, 22 May 2018 (diff | hist) . . (+2) . . 3D Analog Library Generation Using Pubchem and Zinc
- 09:33, 22 May 2018 (diff | hist) . . (+26) . . 3D Analog Library Generation Using Pubchem and Zinc
- 09:16, 22 May 2018 (diff | hist) . . (0) . . N File:Screen Shot 2018-05-22 at 10.15.22 AM.png (top)
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