User contributions
(Latest | Earliest) View (newer 100) (older 100) (20 | 50 | 100 | 250 | 500).
- 22:04, 4 May 2022 (diff | hist) . . (0) . . 2022 AMBER tutorial 3 with PDBID 1X70 (→introduction) (top)
- 22:04, 4 May 2022 (diff | hist) . . (+40) . . 2022 AMBER tutorial 3 with PDBID 1X70
- 22:02, 4 May 2022 (diff | hist) . . (+4,762) . . 2022 AMBER tutorial 3 with PDBID 1X70
- 15:13, 4 May 2022 (diff | hist) . . (+163) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→Focused de novo rescore) (top)
- 15:12, 4 May 2022 (diff | hist) . . (-2) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→Focused de novo rescore)
- 15:11, 4 May 2022 (diff | hist) . . (0) . . N File:6ME2.topscoreligand.png (top)
- 15:10, 4 May 2022 (diff | hist) . . (+160) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→Focused de novo rescore)
- 15:09, 4 May 2022 (diff | hist) . . (+39) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→Focused de novo rescore)
- 15:08, 4 May 2022 (diff | hist) . . (0) . . File:6ME2.dn2ndscoreligand.png (Stonybrook uploaded a new version of File:6ME2.dn2ndscoreligand.png) (top)
- 15:08, 4 May 2022 (diff | hist) . . (0) . . File:6ME2.dnallligands.png (Stonybrook uploaded a new version of File:6ME2.dnallligands.png) (top)
- 15:01, 4 May 2022 (diff | hist) . . (0) . . N File:6ME2.dn2ndscoreligand.png
- 15:01, 4 May 2022 (diff | hist) . . (0) . . N File:6ME2.dnallligands.png
- 21:33, 3 May 2022 (diff | hist) . . (-970) . . 2022 AMBER tutorial 3 with PDBID 1X70
- 21:31, 3 May 2022 (diff | hist) . . (+13,628) . . 2022 AMBER tutorial 3 with PDBID 1X70
- 21:08, 3 May 2022 (diff | hist) . . (+3,802) . . 2022 AMBER tutorial 3 with PDBID 1X70
- 20:54, 3 May 2022 (diff | hist) . . (+1,486) . . N 2022 AMBER tutorial 3 with PDBID 1X70 (Created page with "== "introduction" == In this tutorial, we will be doing molecular dynamics (MD) simulations using Amber 16. This will allow us to obtain much more detailed information abou...")
- 20:33, 3 May 2022 (diff | hist) . . (+4,582) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→MD Analysis) (top)
- 20:11, 3 May 2022 (diff | hist) . . (+2,413) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→MD Production)
- 19:44, 3 May 2022 (diff | hist) . . (+10,927) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Equilibrating the system)
- 17:32, 3 May 2022 (diff | hist) . . (+277) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Using TLeap)
- 17:30, 3 May 2022 (diff | hist) . . (+1,944) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Using TLeap)
- 17:21, 3 May 2022 (diff | hist) . . (+125) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Ligand File Generation)
- 17:19, 3 May 2022 (diff | hist) . . (-16) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Ligand File Generation)
- 17:17, 3 May 2022 (diff | hist) . . (-1) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Receptor File Generation)
- 17:17, 3 May 2022 (diff | hist) . . (-3) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Receptor File Generation)
- 10:44, 3 May 2022 (diff | hist) . . (+195) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Generating Simulation Parameters)
- 10:15, 3 May 2022 (diff | hist) . . (+558) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Generating Simulation Parameters)
- 01:22, 3 May 2022 (diff | hist) . . (+85) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Ligand File Generation)
- 01:17, 3 May 2022 (diff | hist) . . (+511) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Ligand File Generation)
- 00:45, 3 May 2022 (diff | hist) . . (0) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Receptor File Generation)
- 00:44, 3 May 2022 (diff | hist) . . (+914) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→6ME2 Structure Files)
- 23:18, 2 May 2022 (diff | hist) . . (+686) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→6ME2 Structure Files)
- 23:07, 2 May 2022 (diff | hist) . . (+196) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Directory Setup)
- 23:06, 2 May 2022 (diff | hist) . . (+185) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Introduction)
- 14:57, 2 May 2022 (diff | hist) . . (+10) . . 2022 AMBER tutorial 1 with PDBID 6ME2 (→Calculating Hydrogen Bonds)
- 14:56, 2 May 2022 (diff | hist) . . (+434) . . N 2022 AMBER tutorial 1 with PDBID 6ME2 (Created page with "== '''Introduction''' == == '''Directory Setup''' == == '''6ME2 Structure Files''' == === '''Receptor File Generation''' === === '''Ligand File Generation''' === == '''Ge...")
- 10:21, 2 May 2022 (diff | hist) . . (+121) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→Focused de novo growth)
- 10:17, 2 May 2022 (diff | hist) . . (+6,277) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→Focused de novo growth)
- 11:37, 21 April 2022 (diff | hist) . . (0) . . 2022 AMS-536 Spring
- 13:43, 21 March 2022 (diff | hist) . . (-35) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Fixed Anchor Docking) (top)
- 13:43, 21 March 2022 (diff | hist) . . (-71) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Rigid Docking)
- 13:38, 21 March 2022 (diff | hist) . . (+20) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Calculating Molecular Footprint)
- 13:37, 21 March 2022 (diff | hist) . . (-16) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Fixed Anchor Docking)
- 13:34, 21 March 2022 (diff | hist) . . (+8) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Energy Minimization)
- 12:14, 21 March 2022 (diff | hist) . . (+954) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→Focused de novo rescore)
- 12:05, 21 March 2022 (diff | hist) . . (+7,005) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→Focused de novo rescore)
- 18:46, 19 March 2022 (diff | hist) . . (+1) . . 2022 Denovo tutorial 1 with PDBID 6ME2
- 18:45, 19 March 2022 (diff | hist) . . (-15) . . 2022 Denovo tutorial 1 with PDBID 6ME2
- 18:42, 19 March 2022 (diff | hist) . . (+1) . . 2022 Denovo tutorial 1 with PDBID 6ME2
- 18:39, 19 March 2022 (diff | hist) . . (+88) . . 2022 Denovo tutorial 1 with PDBID 6ME2
- 18:35, 19 March 2022 (diff | hist) . . (+2) . . 2022 Denovo tutorial 1 with PDBID 6ME2 (→I. De novo design)
- 18:35, 19 March 2022 (diff | hist) . . (+342) . . N 2022 Denovo tutorial 1 with PDBID 6ME2 (Created page with "This article is a continuation of PDBID 6ME2, with the previous one detailing how to run a virtual screen on this protein. This article will detail how to run a focused de nov...")
- 13:14, 10 March 2022 (diff | hist) . . (0) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Selecting Relevant Spheres)
- 13:12, 10 March 2022 (diff | hist) . . (+2) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Grid Generation)
- 13:12, 10 March 2022 (diff | hist) . . (+102) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Grid Generation)
- 13:11, 10 March 2022 (diff | hist) . . (+1,693) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Generating Box/Grid)
- 12:46, 10 March 2022 (diff | hist) . . (0) . . N File:Afewbubbles.png (top)
- 12:45, 10 March 2022 (diff | hist) . . (+191) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Selecting Relevant Spheres)
- 12:39, 10 March 2022 (diff | hist) . . (+219) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Selecting Relevant Spheres)
- 12:30, 10 March 2022 (diff | hist) . . (0) . . N File:Allthebubbles.png (top)
- 12:29, 10 March 2022 (diff | hist) . . (+113) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Creating Surface Spheres)
- 12:23, 10 March 2022 (diff | hist) . . (+6) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Creating Surface Spheres)
- 12:23, 10 March 2022 (diff | hist) . . (+95) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Creating Surface Spheres)
- 12:21, 10 March 2022 (diff | hist) . . (+562) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Creating Surface Spheres)
- 12:05, 10 March 2022 (diff | hist) . . (+1) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Creating Surface Spheres)
- 12:05, 10 March 2022 (diff | hist) . . (+28) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Creating Surface Spheres)
- 12:04, 10 March 2022 (diff | hist) . . (-318) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Creating Surface Spheres)
- 11:52, 10 March 2022 (diff | hist) . . (+454) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Creating Surface Spheres)
- 11:04, 10 March 2022 (diff | hist) . . (0) . . N File:Surfacesssssss.png (top)
- 11:04, 10 March 2022 (diff | hist) . . (+7) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Generating DMS of receptor)
- 11:03, 10 March 2022 (diff | hist) . . (+20) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Generating DMS of receptor)
- 11:02, 10 March 2022 (diff | hist) . . (-22) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Generating DMS of receptor)
- 11:01, 10 March 2022 (diff | hist) . . (0) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Generating DMS of receptor)
- 10:13, 10 March 2022 (diff | hist) . . (+381) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Generating DMS of receptor)
- 10:11, 10 March 2022 (diff | hist) . . (+66) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Isolating the ligand and receptor)
- 10:07, 10 March 2022 (diff | hist) . . (-90) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Prepping the receptor)
- 10:06, 10 March 2022 (diff | hist) . . (-86) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Prepping the ligand)
- 10:06, 10 March 2022 (diff | hist) . . (0) . . N File:Goodjev.png (top)
- 10:05, 10 March 2022 (diff | hist) . . (0) . . N File:Badjev.png (top)
- 10:05, 10 March 2022 (diff | hist) . . (+222) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Isolating the ligand and receptor)
- 16:34, 9 March 2022 (diff | hist) . . (+10) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Energy Minimization)
- 16:31, 9 March 2022 (diff | hist) . . (0) . . N File:Mol foot 6me2.png (top)
- 16:28, 9 March 2022 (diff | hist) . . (0) . . N File:Lig min score.png (top)
- 16:27, 9 March 2022 (diff | hist) . . (0) . . N File:Rigid with ligand img.png (top)
- 16:27, 9 March 2022 (diff | hist) . . (0) . . N File:Fad with liand img.png (top)
- 16:01, 9 March 2022 (diff | hist) . . (-7) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Required Software)
- 16:01, 9 March 2022 (diff | hist) . . (+7) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Required Software)
- 14:45, 9 March 2022 (diff | hist) . . (-2) . . 2022 DOCK tutorial 3 with PDBID 1X70 (→"Rescore") (top)
- 14:45, 9 March 2022 (diff | hist) . . (-2) . . 2022 DOCK tutorial 3 with PDBID 1X70 (→"Cartesian Minimization")
- 14:45, 9 March 2022 (diff | hist) . . (+12,624) . . 2022 DOCK tutorial 3 with PDBID 1X70 (→Virtual Screen)
- 14:39, 9 March 2022 (diff | hist) . . (+8,883) . . 2022 DOCK tutorial 2 with PDBID 4ZUD (→Rescoring) (top)
- 14:32, 9 March 2022 (diff | hist) . . (+4) . . 2022 DOCK tutorial 3 with PDBID 1X70 (→Virtual Screen)
- 13:44, 9 March 2022 (diff | hist) . . (0) . . 2022 DOCK tutorial 2 with PDBID 4ZUD (→Cartesian Minimization)
- 13:43, 9 March 2022 (diff | hist) . . (+38) . . 2022 DOCK tutorial 2 with PDBID 4ZUD (→Rescoring)
- 13:43, 9 March 2022 (diff | hist) . . (+934) . . 2022 DOCK tutorial 2 with PDBID 4ZUD (→Cartesian Minimization)
- 13:24, 9 March 2022 (diff | hist) . . (+5,678) . . 2022 DOCK tutorial 2 with PDBID 4ZUD (→Footprint Analysis)
- 12:54, 9 March 2022 (diff | hist) . . (+115) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Calculating Molecular Footprint)
- 12:50, 9 March 2022 (diff | hist) . . (0) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Rescoring Docked Molecules)
- 12:49, 9 March 2022 (diff | hist) . . (0) . . 2022 DOCK tutorial 1 with PDBID 6ME2 (→Cartesian Minimization of Docked Molecules)
- 12:45, 9 March 2022 (diff | hist) . . (-17) . . 2022 DOCK tutorial 1 with PDBID 6ME2
(Latest | Earliest) View (newer 100) (older 100) (20 | 50 | 100 | 250 | 500).
