Difference between revisions of "Rizzo Lab Information and Tutorials"

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*[[Tutorials]]  
 
*[[Tutorials]]  
 
** virtual screen, de novo design, genetic algorithm, covalent  
 
** virtual screen, de novo design, genetic algorithm, covalent  
*[[Benchmarking Lab SOP and Results]]  
+
*[[Benchmarking Protocols and Results]]  
 
** testset, pose reproduction, crossdocking, database enrichment SOP and other algorithm results
 
** testset, pose reproduction, crossdocking, database enrichment SOP and other algorithm results
*[[Virtual Screening Compound Ordering SOP]]
 
<!-- *[[Testset Protocols]]-->
 
 
*[[Additional DOCK6 Information]]
 
*[[Additional DOCK6 Information]]
 +
** miscellaneous information for DOCK scoring functions and experiments (some legacy)
 
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Latest revision as of 10:50, 25 March 2024

DOCK

Visualization Software

Basic Linux Tools

Molecular Dynamics

GROMACS

Monte Carlo

Analysis Tools

Databases

Conversion between file types