Difference between revisions of "Rizzo Lab Information and Tutorials"
From Rizzo_Lab
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*[[DOCK Abbreviations Guide]] | *[[DOCK Abbreviations Guide]] | ||
*[[Advanced Dock Utilities/Information]] | *[[Advanced Dock Utilities/Information]] | ||
| − | *[[Virtual Screening SOP]] | + | *[[Virtual Screening Compound Ordering SOP]] |
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Revision as of 13:52, 4 March 2024
Contents
DOCK
Visualization Software
Basic Linux Tools
Molecular Dynamics
GROMACS
Monte Carlo
Analysis Tools
Databases
- PubChem (ligand database)
- NIST (small molecule database)
- ZINC12 Database
- ZINC15 Database
- Families in the Protein Databank
- Automated Family generation from PDB
- Drug-like organic molecules
Conversion between file types
Setting up accounts
