Difference between revisions of "Rizzo Lab Information and Tutorials"
From Rizzo_Lab
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| [[CVS Commands]] | | [[CVS Commands]] | ||
| [[Ethernet Cables]] | | [[Ethernet Cables]] | ||
| + | | [[Rotation students Wiki]] | ||
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| [[Getting a BNL Account]] | | [[Getting a BNL Account]] | ||
| [[Getting a Seawulf Account]] | | [[Getting a Seawulf Account]] | ||
| + | | [[Activating your Seawulf Account]] | ||
| [[Sequence alignment]] | | [[Sequence alignment]] | ||
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| [[NAMD on Seawulf]] | | [[NAMD on Seawulf]] | ||
| [[Dell 5110cn Printer]] | | [[Dell 5110cn Printer]] | ||
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== Insurance == | == Insurance == | ||
[[Research Foundation]] | [[Research Foundation]] | ||
Revision as of 11:14, 8 December 2009
Contents
Visualization Software
Basic Linux Tools
DOCKing
| DOCK Tutorials | Testset Protocols | Scoring Functions | Sampling Methods |
| ZINC Database | Installing DOCK |
Molecular Dynamics
| AMBER Tutorials | AMBER tricks |
| NAMD tutorial | NAMD Amber inputs |
| ptraj |
Monte Carlo
Analysis Tools
Databases
- NCI (ligand database)
- NIST (small molecule database)
- ZINC (ligand database)
- Families in the Protein Databank
- Drug-like organic molecules
