Articles with the most revisions
Showing below up to 250 results in range #1 to #250.
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- 2023 DOCK tutorial 1 with PDBID 4S0V (261 revisions)
- Joe and Brian de novo stuff (253 revisions)
- 2012 DOCK tutorial with Streptavidin (230 revisions)
- Rizzo Lab Members and Contact Information (227 revisions)
- Rizzo Lab Information and Tutorials (196 revisions)
- 2014 DOCK tutorial with HIV Protease (182 revisions)
- Rizzo Lab Research (180 revisions)
- 2012 AMBER Tutorial with Biotin and Streptavidin (174 revisions)
- 2020 AMS-535 Fall (171 revisions)
- 2016 DOCK tutorial with Beta Trypsin (164 revisions)
- 2020 DOCK tutorial 1 with PDBID 3VJK (158 revisions)
- 2010 AMBER Tutorial with Biotin and Streptavidin (157 revisions)
- 2020 DOCK tutorial 3 with PDBID 4F4P (155 revisions)
- 2013 DOCK tutorial with Orotodine Monophosphate Decarboxylase (146 revisions)
- 2021 DOCK tutorial 2 with PDBID 2ZD1 (143 revisions)
- 2021 DOCK tutorial 1 with PDBID 1HW9 (142 revisions)
- 2019 DOCK tutorial 3 with PDBID 3JQZ (138 revisions)
- 2019 DOCK tutorial 2 with PDBID 2P16 (130 revisions)
- 2022 DOCK tutorial 1 with PDBID 6ME2 (120 revisions)
- 2010-2011 AMS-532 Fall-Spring (119 revisions)
- 2023 DOCK tutorial 2 with PDBID 3WZE (118 revisions)
- 2023 AMBER tutorial 1 with PDBID 4S0V (118 revisions)
- 2020 AMS-536 Spring (revised syllabus) (116 revisions)
- 2015 DOCK tutorial with Poly(ADP-ribose) polymerase (PARP) (112 revisions)
- 2021 DOCK tutorial 3 with PDBID 1S19 (108 revisions)
- Rizzo Lab Publications (105 revisions)
- 2014 AMBER tutorial with HIV Protease (104 revisions)
- AMS-531 Laboratory Rotations in Computational Biology (104 revisions)
- 2023 DOCK tutorial 3 with PDBID 2P16 (103 revisions)
- 2022 DOCK tutorial 3 with PDBID 1X70 (102 revisions)
- Rizzo Lab Downloads (98 revisions)
- 2022 DOCK tutorial 2 with PDBID 4ZUD (95 revisions)
- 2018 DOCK tutorial 1 with PDBID 2NNQ (93 revisions)
- 2020 DOCK tutorial 4 with PDBID 6UZW (91 revisions)
- AMBER TI Tutorials (88 revisions)
- 2011 AMBER Tutorial with Biotin and Streptavidin (87 revisions)
- 2021 DOCK tutorial 4 with PDBID 1EFY (87 revisions)
- 2013 AMBER Tutorial with UMP and OMP (86 revisions)
- 2010 DOCK tutorial with Streptavidin (86 revisions)
- 2021 AMS-536 Spring (85 revisions)
- DOCK Denovo Run (82 revisions)
- 2023 Denovo tutorial 2 with PDBID 3WZE (79 revisions)
- 2010 AMS-535 Fall (79 revisions)
- AMS-535 Introduction to Computational Structural Biology and Drug Design (73 revisions)
- 2023 Denovo tutorial 1 with PDBID 4S0V (73 revisions)
- Developer's Info Goals (69 revisions)
- AMS-532 Laboratory Rotations and Journal Club in Computational Biology (66 revisions)
- 2009 AMS-535 Fall (66 revisions)
- Rizzo Lab Weekly Group Meetings (64 revisions)
- AMS-536 Molecular Modeling of Biological Molecules (63 revisions)
- SB2012 (62 revisions)
- Scoring Functions (59 revisions)
- 2016 AMBER tutorial with Beta Trypsin (59 revisions)
- MD Simulation: Protein in Water (58 revisions)
- DOCK VS Development Goals (57 revisions)
- 2011 AMS-535 Fall (57 revisions)
- 2015 AMBER tutorial with PARP (56 revisions)
- 2018 DOCK tutorial 2 with PDBID 1C87 (56 revisions)
- 2018 AMBER tutorial with 2nnq (54 revisions)
- 2019 RCR GROUP MEETING (53 revisions)
- 2015 RCR GROUP MEETING (53 revisions)
- 2017 RCR GROUP MEETING (52 revisions)
- 2019 DOCK tutorial 1 with PDBID 2BXF (52 revisions)
- 2020 AMBER tutorial with PDBID 3VJK (51 revisions)
- 2017 DOCK tutorial 2 with PDB 3GPL NEW (50 revisions)
- 2013 AMS-535 Fall (49 revisions)
- 2017 Denovo design tutorial 2 with PDB 4QMZ (46 revisions)
- 2011 RCR GROUP MEETING (45 revisions)
- 2021 AMBER tutorial 3 with PDBID 1S19 (44 revisions)
- DOCK DN Development Goals (44 revisions)
- 2015-2016 AMS-532 Fall-Spring (44 revisions)
- De novo Developer Progress (44 revisions)
- 2023 AMBER tutorial 3 with PDBID 2P16 (44 revisions)
- 2012 RCR GROUP MEETING (44 revisions)
- 2009-2010 AMS-532 Fall-Spring (43 revisions)
- DOCK GA Development Goals (43 revisions)
- 2015 AMS-536 Spring (43 revisions)
- AMS-532 Journal Club in Computational Biology (41 revisions)
- 2011-2012 AMS-532 Fall-Spring (41 revisions)
- AutoDock4 Pose Reproduction Tutorial (41 revisions)
- DOCK Tutorials (41 revisions)
- 2016 AMS-535 Fall (40 revisions)
- 2020 AMS-536 Spring (39 revisions)
- 2021 Denovo tutorial 1 with PDBID 1HW9 (39 revisions)
- 2021 AMS-535 Fall (38 revisions)
- 2019 Covalent docking tutorial 1 with PDB 5VKG (38 revisions)
- 2013-2014 AMS-532 Fall-Spring (37 revisions)
- 2018 AMS-535 Fall (37 revisions)
- 2017 DOCK tutorial 1 with PDB 4QMZ NEW (37 revisions)
- 2012 AMS-535 Fall (36 revisions)
- 2021-2022 AMS-532 Fall-Spring (35 revisions)
- 2022 AMS-535 Fall (35 revisions)
- Virtual Screening Protocol on BlueGene (IGF-IR system) (35 revisions)
- ZINC15 Database (34 revisions)
- 2010 AMS-536 Spring (34 revisions)
- 2015 AMS-535 Fall (33 revisions)
- Amber on Seawulf (compilation) (32 revisions)
- 2014 RCR GROUP MEETING (32 revisions)
- 2019 Covalent docking tutorial 1 with PDB 2VKG (31 revisions)
- SB2010 (31 revisions)
- 2013 RCR GROUP MEETING (30 revisions)
- 2016-2017 AMS-532 Fall-Spring (29 revisions)
- 2019-2020 AMS-532 Fall-Spring (29 revisions)
- 2014 AMS-535 Fall (29 revisions)
- 2017 AMS-535 Fall (29 revisions)
- 2022 AMS-536 Spring (28 revisions)
- 2011 DOCK tutorial with Streptavidin (28 revisions)
- Parameter List (28 revisions)
- DOCK VS Tutorials (27 revisions)
- 2013 AMS-536 Spring (27 revisions)
- 2014 AMS-536 Spring (27 revisions)
- 2021 Denovo tutorial 3 with PDBID 1S19 (27 revisions)
- Analysis Tools Repository (27 revisions)
- 2019 Denovo design tutorial 3 with PDB 3JQZ (27 revisions)
- Stony Brook Joint Group Meetings in Computational Structural Biology (26 revisions)
- 2011 AMS-536 Spring (26 revisions)
- 2019 AMS-535 Fall (26 revisions)
- 2020 AMS-536 Spring (original syllabus) (26 revisions)
- 2016 AMS-536 Spring (26 revisions)
- AMBER Tutorials (26 revisions)
- 2019 Denovo design tutorial 2 with PDB 2P16 (26 revisions)
- 2019 Denovo design tutorial 1 with PDB 2BXF (25 revisions)
- 2018 Denovo design tutorial 1 with PDB 2NNQ (24 revisions)
- 2022 Denovo tutorial 2 with PDBID 4ZUD (24 revisions)
- 2019 AMBER tutorial with PDBID 2BXF (23 revisions)
- 2017-2018 AMS-532 Fall-Spring (23 revisions)
- 2021 AMBER tutorial 1 with PDBID 1HW9 (22 revisions)
- 2018-2019 AMS-532 Fall-Spring (22 revisions)
- 2017 AMBER tutorial with 4qmz (22 revisions)
- 2012 AMS-536 Spring (22 revisions)
- 2023 AMBER tutorial 2 with PDBID 3WZE (22 revisions)
- 2023 AMS-536 Spring (22 revisions)
- 2020-2021 AMS-532 Fall-Spring (21 revisions)
- 2020 Denovo tutorial 4 with PDBID 6UZW (21 revisions)
- Virtual Screening Protocol (21 revisions)
- 2022 AMBER tutorial 1 with PDBID 6ME2 (20 revisions)
- Make Unique script usage (20 revisions)
- 2017 Dock tutorial (20 revisions)
- NAMD Amber inputs (20 revisions)
- DOCK6 POSE Reproduction (19 revisions)
- Main Page (19 revisions)
- How to purchase compounds for Rizzo lab (19 revisions)
- 2019 AMS-536 Spring (19 revisions)
- Development Goals Archive (18 revisions)
- Seawulf Items Needed (18 revisions)
- 2022 Denovo tutorial 3 with PDBID 1X70 (18 revisions)
- SB2021.v1 (18 revisions)
- 2022-2023 AMS-532 Fall-Spring (18 revisions)
- 2014-2015 AMS-532 Fall-Spring (17 revisions)
- 2023 Denovo tutorial 3 with PDBID 2P16 (17 revisions)
- 2022 RCR GROUP MEETING (17 revisions)
- DGHYD (16 revisions)
- Formating your Thesis (16 revisions)
- 2016 RCR GROUP MEETING (16 revisions)
- 2016 AMBER tutorial with Thrombin (15 revisions)
- Seawulf Cluster Assessment (14 revisions)
- 2022 Denovo tutorial 1 with PDBID 6ME2 (14 revisions)
- 2020 DOCK tutorial 2 with PDBID 2GQG (14 revisions)
- 2020 DOCK tutorial 2 with PDBID XXXX (14 revisions)
- 2018 AMS-536 Spring (14 revisions)
- 2020 Denovo tutorial 1 with PDBID 3VJK (14 revisions)
- 2021 Denovo tutorial 4 with PDBID 1EFY (14 revisions)
- 2020 Denovo tutorial 3 with PDBID 4F4P (13 revisions)
- CONGA Parameter List (13 revisions)
- Energy Scoring Method in Grid (13 revisions)
- BASH scripting (13 revisions)
- 2012-2013 AMS-532 Fall-Spring (13 revisions)
- 2018 AMBER tutorial with 1c87 (13 revisions)
- Per-residue energy decompositions (13 revisions)
- 2018 Denovo design tutorial 2 with PDB 1C87 (12 revisions)
- 2018 RCR GROUP MEETING (12 revisions)
- Server Administration (12 revisions)
- DOCK Release Objectives (12 revisions)
- De novo Benchmarking (12 revisions)
- Joint Group Meeting 2011 (11 revisions)
- Nonstandard residues prep (11 revisions)
- 2017 Denovo refine tutorial with PDB 1BJU (11 revisions)
- Stupid awk tricks (11 revisions)
- Activating your Seawulf Account (11 revisions)
- 3D Analog Library Generation Using Pubchem and Zinc (11 revisions)
- DOCK DN Tutorials (11 revisions)
- Tutorials (11 revisions)
- Joint Group Meeting 2010 (11 revisions)
- Apply for cluster (10 revisions)
- PBS Queue (10 revisions)
- Ligand Enrichment Tutorial (10 revisions)
- Compiling GROMACS on Cluster (10 revisions)
- 2010 LAB (10 revisions)
- DOCK Denovo (9 revisions)
- MPICH (9 revisions)
- Unix (9 revisions)
- GRD-500 Integrity in Science (9 revisions)
- AutoDock Vina Pose Reproduction Tutorial (9 revisions)
- Chimera (9 revisions)
- MATLAB (9 revisions)
- Past Announcements (9 revisions)
- DOCK Denovo Refinement (8 revisions)
- Small Molecule Evolution (DOCK GA) (8 revisions)
- AutoDock4 Benchmark Results (8 revisions)
- DOCK Benchmarking (8 revisions)
- DOCK CV Benchmarking (8 revisions)
- Release (8 revisions)
- Torsion environment (8 revisions)
- 2022 AMBER tutorial 3 with PDBID 1X70 (7 revisions)
- Fragment Library Generation (7 revisions)
- DOCK GA Tutorials (7 revisions)
- 2019 DOCK GA tutorial 1 with 2NNQ (7 revisions)
- MD Simulation: Protein in Water (Pt. 2) (7 revisions)
- 2008 DOCK tutorial with Gleevec (7 revisions)
- MOE (7 revisions)
- DOCK VS Benchmarking (7 revisions)
- Automated Families generation from the Protein Databank (6 revisions)
- Legacy Info (6 revisions)
- TESTSET OBJECTIVES (6 revisions)
- De Novo Design (DOCK DN) (6 revisions)
- Example of an Input file (6 revisions)
- 2017 AMS-536 Spring (6 revisions)
- Dell 5110cn Printer (6 revisions)
- 2017 Denovo design tutorial 1 with PDB 1BJU (5 revisions)
- Joint Group Meeting 2013 (5 revisions)
- Scp files from cluster to NYBlue (5 revisions)
- C Shell Scripting (5 revisions)
- 2009 RCR GROUP MEETING (5 revisions)
- DOCK GA Parameters (5 revisions)
- VMD (5 revisions)
- 2008-2009 LAB (5 revisions)
- Rsync (5 revisions)
- Cluster compilations (5 revisions)
- DOCK GIST Parameters (5 revisions)
- Xmgrace (5 revisions)
- 2008 AMS-535 Fall (5 revisions)
- Installing DOCK (5 revisions)
- Vi (5 revisions)
- NOVA (Navigation and Optimization for Virtual Assembly) (5 revisions)
- Joint Group Meeting 2007-2009 (5 revisions)
- 2010 RCR GROUP MEETING (4 revisions)
- 2009-2010 GRD-500 Fall-Spring (4 revisions)
- DOCK Abbreviations Guide (4 revisions)
- HIV/AIDS (4 revisions)
- 2009 DOCK tutorial with neuraminidase (4 revisions)
- DOCK CV Tutorials (4 revisions)
- Semester Checklist (4 revisions)
- LoadLeveler Chain Jobs (4 revisions)
- 2008 AMS-536 Spring (4 revisions)
- SB2011 testset (4 revisions)
- 2008 RCR GROUP MEETING (4 revisions)
- SLURM (4 revisions)
- AMS-532 Guidlines (3 revisions)
- BlueGene (3 revisions)
- Developer's Info (3 revisions)