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Showing below up to 406 results in range #1 to #406.

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  1. Run.java.csh‏‎ (16:49, 31 January 2008)
  2. Binding Footprint Program‏‎ (16:53, 31 January 2008)
  3. Example scripts‏‎ (17:00, 31 January 2008)
  4. INSPH‏‎ (18:10, 6 February 2008)
  5. Showsph.in‏‎ (18:15, 6 February 2008)
  6. Sequence alignment‏‎ (14:54, 8 February 2008)
  7. Flex.in‏‎ (17:17, 11 February 2008)
  8. 2008 Spring‏‎ (16:08, 20 February 2008)
  9. Grid.in‏‎ (16:53, 20 February 2008)
  10. BOSS Pure Liquid Simulation Notes‏‎ (14:56, 27 February 2008)
  11. Lab-designed code and programs‏‎ (15:11, 10 March 2008)
  12. Rename files in Unix‏‎ (15:11, 10 March 2008)
  13. Restraint04.pdb‏‎ (17:08, 28 March 2008)
  14. Restraint01.pdb‏‎ (17:09, 28 March 2008)
  15. 01mi.in‏‎ (17:14, 28 March 2008)
  16. 04md.in‏‎ (17:15, 28 March 2008)
  17. Disulfide.txt‏‎ (18:30, 28 March 2008)
  18. Config‏‎ (17:57, 4 April 2008)
  19. Visiting BNL‏‎ (16:44, 16 April 2008)
  20. Reference.vmd.script‏‎ (11:19, 21 April 2008)
  21. Restraint.vmd.script‏‎ (11:43, 21 April 2008)
  22. Setup ssh tunnel to NYBlue fen‏‎ (01:12, 24 April 2008)
  23. Vmd.rmsd.csh‏‎ (17:36, 11 May 2008)
  24. PDFCreator‏‎ (12:12, 12 May 2008)
  25. Making images for publication‏‎ (13:46, 12 May 2008)
  26. Using convert command unix‏‎ (14:30, 12 May 2008)
  27. Showbox.in‏‎ (16:29, 5 June 2008)
  28. Rigid.in‏‎ (16:30, 5 June 2008)
  29. Octave‏‎ (11:57, 11 June 2008)
  30. Histograms in R‏‎ (13:53, 11 June 2008)
  31. Apply for NYBlue‏‎ (10:45, 12 June 2008)
  32. Clustering in R‏‎ (15:37, 17 June 2008)
  33. Installing MSMS for VMD‏‎ (16:22, 23 June 2008)
  34. Gnuplot‏‎ (17:00, 14 July 2008)
  35. Make surface‏‎ (17:02, 14 July 2008)
  36. Ways to remove the first line‏‎ (11:19, 18 August 2008)
  37. Research Foundation‏‎ (11:11, 19 August 2008)
  38. Ptraj‏‎ (12:41, 20 August 2008)
  39. Get time estimate for free blocks‏‎ (15:18, 26 August 2008)
  40. Get time for job completion‏‎ (15:19, 26 August 2008)
  41. AMBER tricks‏‎ (15:25, 10 September 2008)
  42. 2007-2008 AMS-532 Fall-Spring‏‎ (17:38, 10 September 2008)
  43. Remove waters from trajectories‏‎ (08:26, 11 September 2008)
  44. 2006-2007 AMS-532 Fall-Spring‏‎ (13:22, 15 September 2008)
  45. X-Win32‏‎ (16:44, 13 January 2009)
  46. Submitting BlueGene Jobs‏‎ (14:22, 16 February 2009)
  47. Compiling Applications for BG/L‏‎ (14:31, 18 February 2009)
  48. Other Meetings‏‎ (13:11, 19 February 2009)
  49. Sampling Methods‏‎ (15:36, 23 February 2009)
  50. Families in the Protein Databank‏‎ (12:17, 25 February 2009)
  51. Common Errors - ctrl M‏‎ (12:37, 25 February 2009)
  52. Amber to pdb‏‎ (12:46, 25 February 2009)
  53. Pdb to mol2‏‎ (12:50, 25 February 2009)
  54. NAMD to mol2‏‎ (12:53, 25 February 2009)
  55. NAMD tutorial‏‎ (13:02, 4 May 2009)
  56. 2008-2009 AMS-532 Fall-Spring‏‎ (23:53, 10 May 2009)
  57. Ethernet Cables‏‎ (14:40, 12 June 2009)
  58. R - Statistical Computing‏‎ (18:50, 19 June 2009)
  59. NAMD Amber inputs‏‎ (12:43, 20 July 2009)
  60. Unix find‏‎ (22:38, 28 July 2009)
  61. Which Unix Distribution?‏‎ (16:36, 8 September 2009)
  62. Drug-like organic molecules‏‎ (21:34, 19 September 2009)
  63. Scp files from cluster to NYBlue‏‎ (14:56, 11 November 2009)
  64. Rotation students Wiki‏‎ (15:02, 8 December 2009)
  65. SDF to mol2‏‎ (12:46, 10 December 2009)
  66. No t4 step2 min.bash‏‎ (12:36, 18 January 2010)
  67. No t4 step2 equiprod.bash‏‎ (12:38, 18 January 2010)
  68. No t4 step3 inputgen.bash‏‎ (12:39, 18 January 2010)
  69. With t4 step1 inputgen.bash‏‎ (12:49, 18 January 2010)
  70. With t4 step2 min.bash‏‎ (12:50, 18 January 2010)
  71. With t4 step2 equiprod.bash‏‎ (12:53, 18 January 2010)
  72. With t4 step3 inputgen.bash‏‎ (12:54, 18 January 2010)
  73. Integration.pl‏‎ (16:08, 19 January 2010)
  74. TIMD integration.py‏‎ (16:10, 19 January 2010)
  75. TIMD integration prep.py‏‎ (16:15, 19 January 2010)
  76. TIMD extraction.py‏‎ (16:16, 19 January 2010)
  77. LoadLeveler Chain Jobs‏‎ (17:41, 25 January 2010)
  78. Amber to mol2 (protein)‏‎ (17:45, 25 January 2010)
  79. Sed - Stream Editor in Unix‏‎ (12:18, 1 February 2010)
  80. Get Job ids to use for llcancel‏‎ (14:09, 5 February 2010)
  81. Pylab‏‎ (15:03, 12 February 2010)
  82. Secure Shell (ssh)‏‎ (13:54, 1 March 2010)
  83. Optimize Polar Hydrogens‏‎ (20:57, 4 March 2010)
  84. Joint Group Meeting 2007-2009‏‎ (12:29, 7 April 2010)
  85. MPICH‏‎ (13:27, 14 April 2010)
  86. Amber on Seawulf (compilation)‏‎ (17:04, 19 April 2010)
  87. No t4 step1 inputgen.bash‏‎ (11:26, 2 June 2010)
  88. AMBER TI Tutorials‏‎ (17:50, 7 June 2010)
  89. Dell 5110cn Printer‏‎ (15:17, 1 July 2010)
  90. Sphere Generation‏‎ (20:34, 24 July 2010)
  91. AMS-532 Guidlines‏‎ (11:09, 28 July 2010)
  92. AMS-532: Lab Rotations/Journal Club Guidelines‏‎ (11:11, 28 July 2010)
  93. 2009-2010 AMS-532 Fall-Spring‏‎ (12:32, 12 August 2010)
  94. 2010 LAB‏‎ (14:31, 13 August 2010)
  95. Cluster compilations‏‎ (16:44, 15 September 2010)
  96. Making images for publication using vmd‏‎ (21:55, 12 October 2010)
  97. Joint Group Meeting 2010‏‎ (13:57, 19 October 2010)
  98. Archiving old data‏‎ (12:50, 29 November 2010)
  99. Past Announcements‏‎ (22:11, 9 December 2010)
  100. SB2011 testset‏‎ (10:53, 21 December 2010)
  101. Setting up RSA SecureID token‏‎ (17:40, 22 December 2010)
  102. 2009 AMBER tutorial with Trpcage‏‎ (11:01, 31 January 2011)
  103. 2008 AMBER tutorial‏‎ (11:01, 31 January 2011)
  104. 2009 DOCK tutorial with neuraminidase‏‎ (11:02, 31 January 2011)
  105. 2008 DOCK tutorial with 1LAH‏‎ (11:02, 31 January 2011)
  106. Blocked Standard Error of the Mean‏‎ (18:41, 7 February 2011)
  107. 2008-2009 LAB‏‎ (16:08, 23 March 2011)
  108. 2009 RCR GROUP MEETING‏‎ (16:21, 23 March 2011)
  109. 2008 RCR GROUP MEETING‏‎ (16:21, 23 March 2011)
  110. 2010 RCR GROUP MEETING‏‎ (16:21, 23 March 2011)
  111. 2011 AMBER Tutorial with Biotin and Streptavidin‏‎ (15:51, 25 March 2011)
  112. VMD‏‎ (08:41, 5 May 2011)
  113. Stupid awk tricks‏‎ (07:31, 6 May 2011)
  114. Fourier fit‏‎ (08:23, 6 May 2011)
  115. Valgrind‏‎ (17:22, 11 May 2011)
  116. 2008 DOCK tutorial with Gleevec‏‎ (10:30, 19 May 2011)
  117. Nonstandard residues prep‏‎ (21:40, 23 May 2011)
  118. Cancer‏‎ (14:31, 24 May 2011)
  119. Influenza‏‎ (14:32, 24 May 2011)
  120. HIV/AIDS‏‎ (14:52, 24 May 2011)
  121. MOE‏‎ (16:59, 15 July 2011)
  122. DOCK Compilation‏‎ (12:47, 18 July 2011)
  123. Genion.mdp‏‎ (15:12, 21 July 2011)
  124. Ubq min.mdp‏‎ (01:10, 22 July 2011)
  125. Ubq md.mdp‏‎ (12:36, 22 July 2011)
  126. Ubq nvt.mdp‏‎ (13:14, 22 July 2011)
  127. Ubq npt.mdp‏‎ (13:14, 22 July 2011)
  128. PBS Queue‏‎ (16:52, 25 July 2011)
  129. Method development‏‎ (09:39, 5 August 2011)
  130. Automated Families generation from the Protein Databank‏‎ (13:35, 12 August 2011)
  131. Ps.m2p‏‎ (11:11, 15 August 2011)
  132. Journal Articles from UCSF‏‎ (17:40, 27 October 2011)
  133. Joint Group Meeting 2012‏‎ (12:38, 15 November 2011)
  134. Joint Group Meeting 2011‏‎ (11:17, 8 December 2011)
  135. 2011 RCR GROUP MEETING‏‎ (12:11, 5 January 2012)
  136. Ghostscript‏‎ (09:19, 9 February 2012)
  137. Semester Checklist‏‎ (07:18, 10 February 2012)
  138. 2010 AMBER Tutorial with Biotin and Streptavidin‏‎ (10:22, 28 February 2012)
  139. MD Simulation: Protein in Water‏‎ (08:22, 29 February 2012)
  140. Stony Brook Joint Group Meetings in Computational Structural Biology‏‎ (12:03, 12 March 2012)
  141. Joint Group Meeting 2013‏‎ (12:04, 12 March 2012)
  142. 2009-2010 GRD-500 Fall-Spring‏‎ (09:32, 24 April 2012)
  143. 2010-2011 GRD-500 Fall-Spring‏‎ (09:34, 24 April 2012)
  144. 2011-2012 GRD-500 Fall-Spring‏‎ (09:35, 24 April 2012)
  145. 2010 GRD-500 Spring‏‎ (09:39, 24 April 2012)
  146. 2010 DOCK tutorial with Streptavidin‏‎ (18:54, 7 May 2012)
  147. 2011 DOCK tutorial with Streptavidin‏‎ (18:55, 7 May 2012)
  148. Virtual Screening Protocol on BlueGene (IGF-IR system)‏‎ (16:06, 25 July 2012)
  149. 2012 DOCK tutorial with Streptavidin‏‎ (12:22, 24 October 2012)
  150. Activating your Seawulf Account‏‎ (12:14, 19 November 2012)
  151. Formating your Thesis‏‎ (23:33, 9 January 2013)
  152. MATLAB‏‎ (18:51, 14 January 2013)
  153. MD Simulation: Protein in Water (Pt. 2)‏‎ (16:58, 15 January 2013)
  154. C Shell Scripting‏‎ (13:17, 30 January 2013)
  155. Rsync‏‎ (21:15, 18 February 2013)
  156. 2012 RCR GROUP MEETING‏‎ (19:27, 8 April 2013)
  157. Compiling GROMACS on Cluster‏‎ (15:59, 31 May 2013)
  158. Xmgrace‏‎ (14:57, 23 July 2013)
  159. AMS-532 Laboratory Rotations and Journal Club in Computational Biology‏‎ (15:18, 5 August 2013)
  160. 2010-2011 AMS-532 Fall-Spring‏‎ (15:22, 5 August 2013)
  161. GRD-500 Integrity in Science‏‎ (16:00, 5 August 2013)
  162. 2011 GRD-500 Spring‏‎ (16:00, 5 August 2013)
  163. 2012 GRD-500 Spring‏‎ (16:03, 5 August 2013)
  164. 2011-2012 AMS-532 Fall-Spring‏‎ (16:08, 5 August 2013)
  165. 2009 AMS-536 Spring‏‎ (17:22, 5 August 2013)
  166. 2010 AMS-536 Spring‏‎ (17:23, 5 August 2013)
  167. 2011 AMS-536 Spring‏‎ (17:23, 5 August 2013)
  168. 2012 AMS-536 Spring‏‎ (17:24, 5 August 2013)
  169. 2008 AMS-535 Fall‏‎ (09:52, 6 August 2013)
  170. 2009 AMS-535 Fall‏‎ (09:57, 6 August 2013)
  171. 2010 AMS-535 Fall‏‎ (09:59, 6 August 2013)
  172. 2011 AMS-535 Fall‏‎ (10:00, 6 August 2013)
  173. 2012 AMS-535 Fall‏‎ (10:03, 6 August 2013)
  174. 2013 AMS-536 Spring‏‎ (10:18, 7 August 2013)
  175. Wiki Editing‏‎ (17:12, 26 August 2013)
  176. Per-residue energy decompositions‏‎ (10:31, 17 September 2013)
  177. Coming Soon‏‎ (17:41, 19 November 2013)
  178. 2013 RCR GROUP MEETING‏‎ (17:06, 6 December 2013)
  179. 2012-2013 AMS-532 Fall-Spring‏‎ (17:11, 23 January 2014)
  180. Server Administration‏‎ (12:09, 7 March 2014)
  181. 2014 AMS-536 Spring‏‎ (15:18, 11 March 2014)
  182. 2012 AMBER Tutorial with Biotin and Streptavidin‏‎ (11:31, 26 March 2014)
  183. Announcements: Fall 2013‏‎ (10:27, 7 April 2014)
  184. 2013 AMS-535 Fall‏‎ (11:57, 7 April 2014)
  185. 2013-2014 AMS-532 Fall-Spring‏‎ (16:25, 9 April 2014)
  186. 2014 AMBER tutorial with HIV Protease‏‎ (21:14, 23 April 2014)
  187. AMBER Lipid Tutorials‏‎ (13:36, 25 August 2014)
  188. 2014 DOCK tutorial with HIV Protease‏‎ (18:05, 17 December 2014)
  189. 2014 RCR GROUP MEETING‏‎ (12:31, 22 December 2014)
  190. 2013 AMBER Tutorial with UMP and OMP‏‎ (16:54, 6 January 2015)
  191. 2014 AMS-535 Fall‏‎ (11:41, 12 January 2015)
  192. 2013 DOCK tutorial with Orotodine Monophosphate Decarboxylase‏‎ (17:26, 14 January 2015)
  193. Energy Scoring Method in Grid‏‎ (14:24, 5 March 2015)
  194. NAMD on Seawulf‏‎ (23:51, 6 March 2015)
  195. 2014-2015 AMS-532 Fall-Spring‏‎ (08:36, 25 March 2015)
  196. 2015 DOCK tutorial with Poly(ADP-ribose) polymerase (PARP)‏‎ (14:16, 25 March 2015)
  197. Getting a BNL Account‏‎ (11:28, 1 May 2015)
  198. Apply for cluster‏‎ (13:53, 1 May 2015)
  199. 2015 AMS-536 Spring‏‎ (14:55, 4 May 2015)
  200. CVS Commands‏‎ (20:02, 10 August 2015)
  201. Main Page‏‎ (12:32, 15 September 2015)
  202. DOCK Benchmarking‏‎ (03:15, 12 November 2015)
  203. 2015 RCR GROUP MEETING‏‎ (10:44, 10 December 2015)
  204. 2016 AMBER tutorial with Thrombin‏‎ (14:16, 6 April 2016)
  205. 2016 AMBER tutorial with Beta Trypsin‏‎ (14:51, 12 May 2016)
  206. 2008 AMS-536 Spring‏‎ (12:44, 1 June 2016)
  207. 2016 RCR GROUP MEETING‏‎ (11:14, 10 August 2016)
  208. 2015-2016 AMS-532 Fall-Spring‏‎ (15:47, 10 August 2016)
  209. 2015 AMS-535 Fall‏‎ (12:42, 12 August 2016)
  210. Seawulf Programs Needed‏‎ (21:21, 12 October 2016)
  211. Seawulf Cluster Assessment‏‎ (15:09, 19 October 2016)
  212. ZINC Database‏‎ (11:18, 27 October 2016)
  213. ZINC12 Database‏‎ (11:28, 27 October 2016)
  214. ZINC15 Database‏‎ (18:08, 22 November 2016)
  215. DOCK Denovo Run‏‎ (16:34, 30 November 2016)
  216. 2016 AMS-535 Fall‏‎ (14:23, 8 December 2016)
  217. DOCK Denovo Refinement‏‎ (14:15, 18 January 2017)
  218. 2016 DOCK tutorial with Beta Trypsin‏‎ (17:53, 30 January 2017)
  219. 2017 Dock tutorial‏‎ (17:47, 1 February 2017)
  220. 2018‏‎ (17:47, 1 February 2017)
  221. 2017a DOCK tutorial‏‎ (16:56, 6 February 2017)
  222. 2017 DOCK tutorial 2 with PDB 3GPL NEW‏‎ (17:59, 8 March 2017)
  223. 2017 DOCK tutorial 1 with PDB 4QMZ NEW‏‎ (18:10, 8 March 2017)
  224. Seawulf Items Needed‏‎ (14:36, 9 March 2017)
  225. 2017 Denovo design tutorial with PDB 1BJU‏‎ (17:09, 22 March 2017)
  226. 2017 AMS-536 Spring‏‎ (16:21, 10 April 2017)
  227. RGD‏‎ (12:34, 28 April 2017)
  228. Joe and Brian de novo stuff‏‎ (13:37, 20 June 2017)
  229. 2017 AMBER tutorial with 4qmz‏‎ (12:18, 5 July 2017)
  230. 2016-2017 AMS-532 Fall-Spring‏‎ (10:28, 11 July 2017)
  231. DOCK Denovo‏‎ (12:36, 3 October 2017)
  232. 2017 RCR GROUP MEETING‏‎ (14:28, 19 December 2017)
  233. De novo DOCK‏‎ (13:44, 17 January 2018)
  234. CONGA‏‎ (10:57, 29 January 2018)
  235. DOCK NOVA‏‎ (14:52, 16 February 2018)
  236. NOVA‏‎ (14:55, 16 February 2018)
  237. CONGA (CONstruction by Genetic Algorithm)‏‎ (14:59, 16 February 2018)
  238. Fragment Library Generation‏‎ (16:00, 19 February 2018)
  239. 2018 AMS-536 Spring‏‎ (15:24, 26 March 2018)
  240. 2018 AMBER tutorial with 1c87‏‎ (16:26, 4 April 2018)
  241. De novo Benchmarking‏‎ (09:54, 26 April 2018)
  242. 3D Analog Library Generation Using Pubchem and Zinc‏‎ (10:36, 22 May 2018)
  243. 2018 RCR GROUP MEETING‏‎ (13:48, 9 July 2018)
  244. NOVA (Navigation and Optimization for Virtual Assembly)‏‎ (12:13, 25 July 2018)
  245. 2017-2018 AMS-532 Fall-Spring‏‎ (11:12, 25 August 2018)
  246. CONGA Parameter List‏‎ (15:11, 28 August 2018)
  247. Example of an Input file‏‎ (14:46, 6 September 2018)
  248. De Novo Design (previously NOVA)‏‎ (16:27, 6 September 2018)
  249. Make Unique script usage‏‎ (16:35, 6 September 2018)
  250. Footprint Plot Visualization‏‎ (12:14, 7 September 2018)
  251. Example of an CONGA Input file‏‎ (11:27, 10 September 2018)
  252. De Novo Design‏‎ (11:30, 10 September 2018)
  253. Gdb (GNU Debugger)‏‎ (10:15, 19 October 2018)
  254. 2018 DOCK tutorial 2 with PDBID 1C87‏‎ (15:12, 12 November 2018)
  255. Release‏‎ (10:48, 3 December 2018)
  256. 2018 AMS-535 Fall‏‎ (21:54, 3 December 2018)
  257. Virtual Screening Protocol‏‎ (12:10, 4 December 2018)
  258. Parameter List‏‎ (11:43, 25 January 2019)
  259. DOCK Tutorials‏‎ (15:26, 30 January 2019)
  260. Outdated Info‏‎ (11:54, 4 February 2019)
  261. Slick awk tricks‏‎ (12:01, 4 February 2019)
  262. Setting up insurance through Research Foundation‏‎ (12:10, 4 February 2019)
  263. Formatting your Thesis‏‎ (12:10, 4 February 2019)
  264. DOCK GA Parameter List‏‎ (12:18, 4 February 2019)
  265. BlueGene‏‎ (12:20, 4 February 2019)
  266. Analog Library - Pubchem & Zinc‏‎ (12:21, 4 February 2019)
  267. Automated Family generation from PDB‏‎ (12:22, 4 February 2019)
  268. Installing DOCK‏‎ (12:30, 4 February 2019)
  269. DOCK GA Developer Progress‏‎ (12:31, 4 February 2019)
  270. DOCK Installation‏‎ (12:31, 4 February 2019)
  271. De novo Developer Progress‏‎ (12:53, 4 February 2019)
  272. Benchmarking‏‎ (13:05, 4 February 2019)
  273. DOCK DN Benchmarking‏‎ (13:06, 4 February 2019)
  274. Testset Protocols‏‎ (13:12, 4 February 2019)
  275. General Dock Development Goals‏‎ (11:29, 5 February 2019)
  276. Small Molecule Evolution (DOCK GA)‏‎ (11:34, 5 February 2019)
  277. Example Input Files‏‎ (11:36, 5 February 2019)
  278. DOCK DN Input File(s)‏‎ (11:37, 5 February 2019)
  279. DOCK GA Input File(s)‏‎ (11:37, 5 February 2019)
  280. De Novo Design (DOCK DN)‏‎ (11:38, 5 February 2019)
  281. Advanced Dock Utilities‏‎ (11:41, 5 February 2019)
  282. DOCK DN Utilities‏‎ (11:42, 5 February 2019)
  283. DOCK VS Utilities‏‎ (11:43, 5 February 2019)
  284. DOCK VS Parameters‏‎ (11:45, 5 February 2019)
  285. Legacy Info‏‎ (11:48, 5 February 2019)
  286. General Dock Utilities‏‎ (11:55, 5 February 2019)
  287. DOCK VS Utilities/Info‏‎ (11:57, 5 February 2019)
  288. DOCK DN Utilities/Info‏‎ (11:58, 5 February 2019)
  289. General Dock Utilities/Info‏‎ (11:58, 5 February 2019)
  290. Advanced Dock Utilities/Information‏‎ (11:58, 5 February 2019)
  291. Chimera‏‎ (10:48, 6 February 2019)
  292. DGHYD‏‎ (16:47, 6 February 2019)
  293. Developer's Info‏‎ (11:26, 7 February 2019)
  294. Rizzo Lab Weekly Group Meetings‏‎ (11:13, 11 February 2019)
  295. 2016 AMS-536 Spring‏‎ (15:42, 19 February 2019)
  296. 2018 AMBER tutorial with 2nnq‏‎ (21:39, 2 April 2019)
  297. 2019 AMBER tutorial with PDBID 2BXF‏‎ (16:14, 19 April 2019)
  298. DOCK CV Development Goals‏‎ (17:01, 14 May 2019)
  299. DOCK CV Input File(s)‏‎ (17:16, 14 May 2019)
  300. Parameter List/Explanations‏‎ (11:05, 17 May 2019)
  301. DOCK GIST Parameters‏‎ (10:35, 21 May 2019)
  302. SB2010‏‎ (10:28, 10 June 2019)
  303. Example of an Single Molecule Evolution Input file‏‎ (16:25, 17 June 2019)
  304. Example of an Ensemble Evolution Input file‏‎ (16:29, 17 June 2019)
  305. DOCK GA Tutorials‏‎ (16:29, 24 June 2019)
  306. 2019 DOCK GA tutorial 1 with 2NNQ‏‎ (13:02, 25 June 2019)
  307. 2015 AMBER tutorial with PARP‏‎ (12:53, 26 June 2019)
  308. SB2012‏‎ (15:24, 6 September 2019)
  309. 2019 DOCK tutorial 2 with PDBID 2P16‏‎ (12:35, 12 December 2019)
  310. 2018 DOCK tutorial 1 with PDBID 2NNQ‏‎ (12:46, 12 December 2019)
  311. 2019 Denovo design tutorial 2 with PDB 2P16‏‎ (12:46, 17 December 2019)
  312. 2019 Denovo design tutorial 3 with PDB 3JQZ‏‎ (12:49, 17 December 2019)
  313. 2018 Denovo design tutorial 1 with PDB 2NNQ‏‎ (12:49, 17 December 2019)
  314. 2018 Denovo design tutorial 2 with PDB 1C87‏‎ (12:50, 17 December 2019)
  315. 2017 Denovo design tutorial 1 with PDB 1BJU‏‎ (12:52, 17 December 2019)
  316. 2017 Denovo design tutorial 2 with PDB 4QMZ‏‎ (12:55, 17 December 2019)
  317. 2019 RCR GROUP MEETING‏‎ (13:04, 13 January 2020)
  318. 2019 AMS-536 Spring‏‎ (12:08, 22 January 2020)
  319. Unix‏‎ (22:28, 22 January 2020)
  320. SLURM‏‎ (12:46, 23 January 2020)
  321. Vi‏‎ (16:03, 24 January 2020)
  322. 2019 Covalent docking tutorial 1 with PDB 2VKG‏‎ (11:38, 27 January 2020)
  323. Analysis Tools Repository‏‎ (14:14, 3 February 2020)
  324. 2020 DOCK tutorial 1 with PDBID XXXX‏‎ (15:37, 5 February 2020)
  325. 2020 DOCK tutorial 4 with PDBID XXXX‏‎ (16:48, 5 February 2020)
  326. 2020 DOCK tutorial 2 with PDBID XXXX‏‎ (11:20, 16 February 2020)
  327. 2020 DOCK tutorial 4 with PDBID 6UZW‏‎ (15:45, 3 March 2020)
  328. 2017 Denovo refinement tutorial with PDB 1BJU‏‎ (17:25, 4 March 2020)
  329. 2020 DOCK tutorial 3 with PDBID 4F4P‏‎ (14:10, 9 March 2020)
  330. 2019 DOCK tutorial 1 with PDBID 2BXF‏‎ (14:35, 9 March 2020)
  331. 2019 Denovo design tutorial 1 with PDB 2BXF‏‎ (13:58, 10 March 2020)
  332. 2020 Denovo tutorial 3 with PDBID 4F4P‏‎ (14:05, 10 March 2020)
  333. 2020 DOCK tutorial 2 with PDBID 2GQG‏‎ (14:49, 11 March 2020)
  334. 2020 DOCK tutorial 1 with PDBID 3VJK‏‎ (00:23, 16 March 2020)
  335. 2020 AMS-536 Spring‏‎ (15:47, 18 March 2020)
  336. 2020 AMS-536 Spring (original syllabus)‏‎ (10:20, 19 March 2020)
  337. DOCK CV Benchmarking‏‎ (15:14, 25 March 2020)
  338. 2020 Denovo tutorial 2 with PDBID 2GQG‏‎ (13:03, 6 April 2020)
  339. DOCK Abbreviations Guide‏‎ (10:57, 15 April 2020)
  340. 2020 Denovo tutorial 1 with PDBID 3VJK‏‎ (16:51, 20 April 2020)
  341. 2020 AMS-536 Spring (revised syllabus)‏‎ (16:29, 27 April 2020)
  342. Ligand Enrichment Tutorial‏‎ (12:22, 15 July 2020)
  343. BASH scripting‏‎ (16:19, 15 July 2020)
  344. 2019 Covalent docking tutorial 1 with PDB 5VKG‏‎ (16:01, 20 July 2020)
  345. AutoDock4 Benchmark Results‏‎ (21:45, 10 August 2020)
  346. AutoDock Vina Pose Reproduction Tutorial‏‎ (10:24, 12 August 2020)
  347. AutoDock4 Pose Reproduction Tutorial‏‎ (12:25, 12 August 2020)
  348. DOCK6 POSE Reproduction‏‎ (12:16, 16 August 2020)
  349. DOCK VS Benchmarking‏‎ (12:21, 16 August 2020)
  350. AutoDock Vina Benchmark Results‏‎ (12:39, 16 August 2020)
  351. 2019-2020 AMS-532 Fall-Spring‏‎ (15:18, 19 August 2020)
  352. 2017 AMS-535 Fall‏‎ (12:58, 20 August 2020)
  353. 2019 AMS-535 Fall‏‎ (13:01, 20 August 2020)
  354. Tutorials‏‎ (11:28, 15 September 2020)
  355. Scoring Functions‏‎ (12:50, 31 October 2020)
  356. 2020-2021 AMS-532 Fall-Spring‏‎ (14:49, 5 November 2020)
  357. Rizzo Lab Research‏‎ (15:50, 5 November 2020)
  358. Rizzo Lab Publications‏‎ (17:33, 5 November 2020)
  359. DOCK GA Parameters‏‎ (16:41, 9 March 2021)
  360. 2021 Denovo tutorial 3 with PDBID 1S19‏‎ (16:24, 15 March 2021)
  361. 2020 Denovo tutorial 4 with PDBID 6UZW‏‎ (22:41, 17 March 2021)
  362. 2021 Denovo tutorial 1 with PDBID 1HW9‏‎ (00:42, 2 April 2021)
  363. 2021 Denovo tutorial 4 with PDBID 1EFY‏‎ (11:09, 5 April 2021)
  364. 2021 DOCK tutorial 2 with PDBID 2ZD1‏‎ (00:25, 6 April 2021)
  365. 2021 Denovo tutorial 2 with PDBID 2ZD1‏‎ (10:46, 6 April 2021)
  366. 2021 AMBER tutorial 3 with PDBID 1S19‏‎ (23:58, 11 April 2021)
  367. 2020 AMBER tutorial with PDBID 3VJK‏‎ (15:27, 14 April 2021)
  368. 2017 Denovo refine tutorial with PDB 1BJU‏‎ (12:15, 3 May 2021)
  369. 2021 DOCK tutorial 4 with PDBID 1EFY‏‎ (21:52, 3 May 2021)
  370. How to purchase compounds for Rizzo lab‏‎ (11:05, 5 May 2021)
  371. 2021 AMBER tutorial 1 with PDBID 1HW9‏‎ (01:59, 7 May 2021)
  372. DOCK DN Parameters‏‎ (15:17, 21 May 2021)
  373. Rizzo Lab Information and Tutorials‏‎ (09:56, 16 June 2021)
  374. Virtual Screening SOP‏‎ (14:03, 16 June 2021)
  375. AMS-535 Introduction to Computational Structural Biology and Drug Design‏‎ (13:39, 17 August 2021)
  376. AMS-536 Molecular Modeling of Biological Molecules‏‎ (15:05, 17 August 2021)
  377. 2021 AMS-536 Spring‏‎ (15:17, 17 August 2021)
  378. 2018-2019 AMS-532 Fall-Spring‏‎ (16:45, 17 August 2021)
  379. 2020 AMS-535 Fall‏‎ (19:17, 8 September 2021)
  380. AMS-532 Journal Club in Computational Biology‏‎ (14:19, 29 September 2021)
  381. Rizzo Lab Downloads‏‎ (19:13, 18 November 2021)
  382. SB2021.v1‏‎ (01:22, 19 November 2021)
  383. 2021-2022 AMS-532 Fall-Spring‏‎ (12:51, 1 December 2021)
  384. 2021 AMS-535 Fall‏‎ (21:11, 3 December 2021)
  385. AMS-531 Laboratory Rotations in Computational Biology‏‎ (09:39, 9 February 2022)
  386. DOCK DN Development Goals‏‎ (11:37, 17 February 2022)
  387. DOCK DN Tutorials‏‎ (17:12, 23 February 2022)
  388. Rizzo Lab Members and Contact Information‏‎ (16:05, 28 February 2022)
  389. DOCK CV Tutorials‏‎ (11:55, 7 March 2022)
  390. 2019 DOCK tutorial 3 with PDBID 3JQZ‏‎ (12:39, 7 March 2022)
  391. 2021 DOCK tutorial 1 with PDBID 1HW9‏‎ (12:41, 7 March 2022)
  392. 2021 DOCK tutorial 3 with PDBID 1S19‏‎ (12:42, 7 March 2022)
  393. DOCK VS Tutorials‏‎ (12:43, 7 March 2022)
  394. 2022 Denovo tutorial 2 with PDBID 4ZUD‏‎ (16:56, 7 March 2022)
  395. 2022 DOCK tutorial 2 with PDBID 4ZUD‏‎ (14:39, 9 March 2022)
  396. 2022 DOCK tutorial 3 with PDBID 1X70‏‎ (14:45, 9 March 2022)
  397. AMBER Tutorials‏‎ (16:16, 9 March 2022)
  398. 2022 Denovo tutorial 3 with PDBID 1X70‏‎ (11:39, 21 March 2022)
  399. 2022 DOCK tutorial 1 with PDBID 6ME2‏‎ (13:43, 21 March 2022)
  400. DOCK GA Development Goals‏‎ (16:13, 15 April 2022)
  401. 2022 AMS-536 Spring‏‎ (11:40, 21 April 2022)
  402. 2022 AMBER tutorial 1 with PDBID 6ME2‏‎ (20:33, 3 May 2022)
  403. 2022 Denovo tutorial 1 with PDBID 6ME2‏‎ (15:13, 4 May 2022)
  404. 2022 AMBER tutorial 3 with PDBID 1X70‏‎ (22:04, 4 May 2022)
  405. DOCK Release Objectives‏‎ (14:39, 16 May 2022)
  406. DOCK VS Development Goals‏‎ (12:26, 21 June 2022)

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